Distribution of heterozygous markers in the MM population genomes. Panel a shows average heterozygosity in telomeric regions (white bars) and pericentromeric regions (black bars). Pericentromeric regions are defined as 20 cM windows around centromeric positions. Panel b shows heterozygosity averaged over 1 Mb bins across the MM lines genomes (proportion of heterozygosity increasing from white to red, as reported in the right bar). There are few positional enrichments of heterozygosity, the most marked in Chr 8 pericentromeric region, as evident from panel a. (TIFF 133 kb
Quantitative data for MM founders’ sequencing and expression. For sequencing, raw reads count and me...
MM population breeding design, organized in 35 subfamilies. In blue and red, single and double intro...
Phenotypic estimated values of the eight founders and 529 MM lines analyzed for days to pollen shed ...
Genomic composition of the MM population. Panel a shows the distribution of the number of recombinat...
Linkage disequilibrium within the flowering time QTL confidence interval. Panel a shows the heat map...
Distribution of phenotypic estimated values across the MM lines. Frequency classes of MM lines are c...
Structure in the MM population. A principal components (PC) analysis on MM founders genotypes is sho...
Average power of the MAGIC maize population as a function of the number of lines analyzed. Plot desi...
QTL scan for grain yield. In panel a, the full model scan. On the x axis, the physical position from...
QTL scan for days to pollen shed. In panel a, the full model scan. On the x axis, the physical posit...
QTL scan for ear height. In panel a, the full model scan. On the x axis, the physical position from ...
Suggestive loci (P <0.63) for days to pollen shed (PS), ear height (EH), plant height (PH), and grai...
Mean, range, genotypic variance (σ 2 g ), genotype × environment interaction variance (σ 2 ge ), res...
Genes whose expression in the founder lines matches founder effects (FDR <0.05) in ± 1 Mb QTL interv...
Genes whose expression in the founder lines matches founder effects (FDR <0.05) in ± 1 Mb QTL interv...
Quantitative data for MM founders’ sequencing and expression. For sequencing, raw reads count and me...
MM population breeding design, organized in 35 subfamilies. In blue and red, single and double intro...
Phenotypic estimated values of the eight founders and 529 MM lines analyzed for days to pollen shed ...
Genomic composition of the MM population. Panel a shows the distribution of the number of recombinat...
Linkage disequilibrium within the flowering time QTL confidence interval. Panel a shows the heat map...
Distribution of phenotypic estimated values across the MM lines. Frequency classes of MM lines are c...
Structure in the MM population. A principal components (PC) analysis on MM founders genotypes is sho...
Average power of the MAGIC maize population as a function of the number of lines analyzed. Plot desi...
QTL scan for grain yield. In panel a, the full model scan. On the x axis, the physical position from...
QTL scan for days to pollen shed. In panel a, the full model scan. On the x axis, the physical posit...
QTL scan for ear height. In panel a, the full model scan. On the x axis, the physical position from ...
Suggestive loci (P <0.63) for days to pollen shed (PS), ear height (EH), plant height (PH), and grai...
Mean, range, genotypic variance (σ 2 g ), genotype × environment interaction variance (σ 2 ge ), res...
Genes whose expression in the founder lines matches founder effects (FDR <0.05) in ± 1 Mb QTL interv...
Genes whose expression in the founder lines matches founder effects (FDR <0.05) in ± 1 Mb QTL interv...
Quantitative data for MM founders’ sequencing and expression. For sequencing, raw reads count and me...
MM population breeding design, organized in 35 subfamilies. In blue and red, single and double intro...
Phenotypic estimated values of the eight founders and 529 MM lines analyzed for days to pollen shed ...