<p>(A) PCA in the 50<sup>th</sup> day, the 100<sup>th</sup> day and the 150<sup>th</sup> day were performed based on the genera abundance of the microbial genomes. (B) Main genus composition was a percentage of total assigned sequences. (C) Bacterial phyla distribution as a percentage of total sequences. (D) Heatmap represents a sample of a color, abundance of a genus is a longitudinal sample clustering situation, reflecting on the case of multiple samples at the level of community composition similarity. All presented results are statistically significant (p<0.05) as assessed by the Wilcoxon test.</p
<p>Pie charts represent the mean frequencies for the main bacterial phyla in (A) ileum, (B) cecum an...
<p>For each subject (S#), samples are ordered from first to last time points. Bacterial abundances d...
<p>Scaled PCA of the 23 most abundant taxa (representing ≥0.5% of the average relative abundance), f...
<p>Microbial diversity indexes (A). Principal component analysis based on the relative abundance dis...
<p>The datasets are grouped on the X-axis first by the sampling site, then by the sample physical st...
<p>Phylogenetic composition of the major bacterial phyla (and proteobacterial subclasses) in the mes...
<p>A. Fraction of sequence counts in each of the individual samples, color coded by sample group. Gr...
<p>PCA was carried out on genus-level microbiome datasets, as described in the text. PC1, PC2, and P...
<p>Cecal bacterial community compositions of individual samples. Each row represents the cecal bacte...
<p>PCA was based on relative abundances of bacterial phyla, proteobacterial classes, and candidate d...
<p>Sequences in 3% OTUs were classified and grouped at the phylum level, with <i>Proteobacteria</i> ...
<p>A phylogenetic tree demonstrating bacterial abundance is present in the center. Each circle depic...
<p>PCA analysis with linear ordination methods was used to explore the correlation between dominant ...
<p>The members of the phyla Alphaproteobacteria, Gammaproteobacteria, Deltaproteobacteria, Actinobac...
<p>(A) Heatmap with double clustering. The microcosm conditions are clustered at the top and bacteri...
<p>Pie charts represent the mean frequencies for the main bacterial phyla in (A) ileum, (B) cecum an...
<p>For each subject (S#), samples are ordered from first to last time points. Bacterial abundances d...
<p>Scaled PCA of the 23 most abundant taxa (representing ≥0.5% of the average relative abundance), f...
<p>Microbial diversity indexes (A). Principal component analysis based on the relative abundance dis...
<p>The datasets are grouped on the X-axis first by the sampling site, then by the sample physical st...
<p>Phylogenetic composition of the major bacterial phyla (and proteobacterial subclasses) in the mes...
<p>A. Fraction of sequence counts in each of the individual samples, color coded by sample group. Gr...
<p>PCA was carried out on genus-level microbiome datasets, as described in the text. PC1, PC2, and P...
<p>Cecal bacterial community compositions of individual samples. Each row represents the cecal bacte...
<p>PCA was based on relative abundances of bacterial phyla, proteobacterial classes, and candidate d...
<p>Sequences in 3% OTUs were classified and grouped at the phylum level, with <i>Proteobacteria</i> ...
<p>A phylogenetic tree demonstrating bacterial abundance is present in the center. Each circle depic...
<p>PCA analysis with linear ordination methods was used to explore the correlation between dominant ...
<p>The members of the phyla Alphaproteobacteria, Gammaproteobacteria, Deltaproteobacteria, Actinobac...
<p>(A) Heatmap with double clustering. The microcosm conditions are clustered at the top and bacteri...
<p>Pie charts represent the mean frequencies for the main bacterial phyla in (A) ileum, (B) cecum an...
<p>For each subject (S#), samples are ordered from first to last time points. Bacterial abundances d...
<p>Scaled PCA of the 23 most abundant taxa (representing ≥0.5% of the average relative abundance), f...