<p>The datasets are grouped on the X-axis first by the sampling site, then by the sample physical state (free-living, FL; particle-associated, PA), then by the sampling depth (Bottom, hypolimnion; Middle, thermocline). (A) The community composition is shown at the phylum level (or class level for Proteobacteria). “Others” denote all phyla with < 1% total abundance, and “unclassified” denote the percentage abundance of sequences that could not be classified with accuracy at the phylum level. (B-G) Sub-class level classification of (B) Bacteroidetes, (C) Gamma-Proteobacteria, (D) Beta-Proteobacteria, and (E) Verrucomicrobia, (F) Planctomycetes, and Alpha-Proteobacteria. The Y-axis in (B-G) shows percentage within total Phylum/Class sequences ...
<p>Phylogenetic compositions of the bacteria in the 2-d (2D) and 14-d (14D) cultures were analyzed. ...
<p>The sampling depth is denoted by color; epilimnion (red), thermocline (green), and hypolimnion (b...
<p>Reconstructed full-length OTUs were assigned taxonomy by the RDP classifier, and relative abundan...
<p>UPGMA cluster tree based on Bray-Curtis dissimilarity obtained based on the 97% cutoff level; <b>...
<p>Plotted contigs correspond to (A) <i>Micromonospora</i> (<i>Actinobacteria</i>) in thermophilic c...
Composition is based on all sequences detected at the different sampling locations at (A) phylum- an...
<p>A, the relative abundances of different phyla; B, the relative abundances of different classes in...
<p>Phylogenetic composition of the major bacterial phyla (and proteobacterial subclasses) in the mes...
The bottom half of the figure shows four heatmaps corresponding to each of the four enterotypes iden...
The % abundances of different bacterial phyla in each treatment group are shown in different colors....
<p>PCA was based on relative abundances of bacterial phyla, proteobacterial classes, and candidate d...
<p>Microbial community structures distribution of water and sediment samples at phylum level.</p
<p>(A) Heatmap with double clustering. The microcosm conditions are clustered at the top and bacteri...
<p>Cecal bacterial community compositions of individual samples. Each row represents the cecal bacte...
Dendrogram based on weighted Unifrac measures of the microbial community rarefied at 61,000 sequence...
<p>Phylogenetic compositions of the bacteria in the 2-d (2D) and 14-d (14D) cultures were analyzed. ...
<p>The sampling depth is denoted by color; epilimnion (red), thermocline (green), and hypolimnion (b...
<p>Reconstructed full-length OTUs were assigned taxonomy by the RDP classifier, and relative abundan...
<p>UPGMA cluster tree based on Bray-Curtis dissimilarity obtained based on the 97% cutoff level; <b>...
<p>Plotted contigs correspond to (A) <i>Micromonospora</i> (<i>Actinobacteria</i>) in thermophilic c...
Composition is based on all sequences detected at the different sampling locations at (A) phylum- an...
<p>A, the relative abundances of different phyla; B, the relative abundances of different classes in...
<p>Phylogenetic composition of the major bacterial phyla (and proteobacterial subclasses) in the mes...
The bottom half of the figure shows four heatmaps corresponding to each of the four enterotypes iden...
The % abundances of different bacterial phyla in each treatment group are shown in different colors....
<p>PCA was based on relative abundances of bacterial phyla, proteobacterial classes, and candidate d...
<p>Microbial community structures distribution of water and sediment samples at phylum level.</p
<p>(A) Heatmap with double clustering. The microcosm conditions are clustered at the top and bacteri...
<p>Cecal bacterial community compositions of individual samples. Each row represents the cecal bacte...
Dendrogram based on weighted Unifrac measures of the microbial community rarefied at 61,000 sequence...
<p>Phylogenetic compositions of the bacteria in the 2-d (2D) and 14-d (14D) cultures were analyzed. ...
<p>The sampling depth is denoted by color; epilimnion (red), thermocline (green), and hypolimnion (b...
<p>Reconstructed full-length OTUs were assigned taxonomy by the RDP classifier, and relative abundan...