Network Parameters. Some network parameter are included to gain clear insight about four PPINs and IPN. Also, all calculated external clustering measures and indices are presented in this table. The ranges for Rand, Jaccard and Fowlkes-Mallows are [0, 1] which are presented in percent whereas the Minkowski rang is [0, +â). These values are computed for all species and five clustering algorithms. (DOCX 17Â kb
Figure S1. Workflow of this study. Figure S2. Overview of the ALL-PPI network. Figure S3. Degree dis...
Constructed tissue-specific protein interaction networks in 16 tissues. (XLSX 7067 kb
Features of the PD, FTD and PS networks. A. Summary of the main features of each interactome and lev...
Some details regarding the five clustering algorithm algorithms (MCL, RNSC, CR, LD and GAPPI) are de...
IPN. The IPN derived from the four different PPINs of four species is shown. They include human, wor...
Clustering properties results. These properties include connectivity, Dunn and Silhouette scores. Th...
Optimal number of clusters. The suitable number of clusters for hierarchical clustering method was c...
Table S1. Performance comparison on known protein complexes using ClusterONE. Table S2. Performance ...
Fitted power law distribution. The Degree distribution of each network has been compared to the powe...
<p>The complete list of protein interaction networks analyzed is given together with the species, sy...
Complete F-measure results. This file contains a table with F-measure values for all tested clusteri...
Supplementary Tables. This file provides the supplementary tables (Tables S1âS24) that illustrate ...
Detailed Experimental settings. Protein complex prediction for large protein protein interaction net...
Visual assessment of cluster tendency plots. Each rectangular represents the clusters of the calcula...
Complete enrichment results. This file contains a table with numbers of enriched terms for all teste...
Figure S1. Workflow of this study. Figure S2. Overview of the ALL-PPI network. Figure S3. Degree dis...
Constructed tissue-specific protein interaction networks in 16 tissues. (XLSX 7067 kb
Features of the PD, FTD and PS networks. A. Summary of the main features of each interactome and lev...
Some details regarding the five clustering algorithm algorithms (MCL, RNSC, CR, LD and GAPPI) are de...
IPN. The IPN derived from the four different PPINs of four species is shown. They include human, wor...
Clustering properties results. These properties include connectivity, Dunn and Silhouette scores. Th...
Optimal number of clusters. The suitable number of clusters for hierarchical clustering method was c...
Table S1. Performance comparison on known protein complexes using ClusterONE. Table S2. Performance ...
Fitted power law distribution. The Degree distribution of each network has been compared to the powe...
<p>The complete list of protein interaction networks analyzed is given together with the species, sy...
Complete F-measure results. This file contains a table with F-measure values for all tested clusteri...
Supplementary Tables. This file provides the supplementary tables (Tables S1âS24) that illustrate ...
Detailed Experimental settings. Protein complex prediction for large protein protein interaction net...
Visual assessment of cluster tendency plots. Each rectangular represents the clusters of the calcula...
Complete enrichment results. This file contains a table with numbers of enriched terms for all teste...
Figure S1. Workflow of this study. Figure S2. Overview of the ALL-PPI network. Figure S3. Degree dis...
Constructed tissue-specific protein interaction networks in 16 tissues. (XLSX 7067 kb
Features of the PD, FTD and PS networks. A. Summary of the main features of each interactome and lev...