Species-specific ω-lineage estimates. The ω-lineage estimates under the assumption of the branch-specific two-ratios model. Species-specific ω-lineage was calculated considering the species tree and the root-to-tip labeling. (PDF 67 kb
Substitution rates of autosomal loci (A and C; y-axis unit is 10-9 per site per year) and ratios of ...
Phylogenetic trees of avian β-defensin and cathelicidin genes. Branches with evidence suggesting ep...
Phylogenetic trees of cyt b , ND2 and cyt b + ND2. Bayesian phylogenetic trees of ospreys construct...
Phylogenetic reconstruction of the RH1 217 residue in birds. The species tree was used as described ...
Co-evolution between opsins and the melanin-based plumage coloration genes in birds. Association tes...
Genomic localization of the genes used for the co-evolution analysis. Genomic localization of the vi...
Avian opsin and melanin-based plumage coloration sequences. Accession numbers are indicated for the ...
Species-specific branch selection tests. The one-ratio model (H0) was tested against the two-ratios ...
Log GC ratio pairwise comparisons between the avian opsins. The presented p-values are corrected usi...
Mammalian opsin sequences. Accession number of the mammalian opsins sequences used for site selectio...
Avian sw2 and lw sequences. Accession number of the sw2 and lw sequences used for site selection ana...
Site-selection tests for the avian and mammalian opsins and the melanin-based coloration genes. The ...
UVS/VS condition for avian sw1 sequences. Avian sw1 sequences used in this study and the respective ...
Saturation analysis. The presence of saturation in base substitution for each of the gene alignment ...
Genomic data summary. (A) Proportion of total sequence data (144 million paired-end sequences) obtai...
Substitution rates of autosomal loci (A and C; y-axis unit is 10-9 per site per year) and ratios of ...
Phylogenetic trees of avian β-defensin and cathelicidin genes. Branches with evidence suggesting ep...
Phylogenetic trees of cyt b , ND2 and cyt b + ND2. Bayesian phylogenetic trees of ospreys construct...
Phylogenetic reconstruction of the RH1 217 residue in birds. The species tree was used as described ...
Co-evolution between opsins and the melanin-based plumage coloration genes in birds. Association tes...
Genomic localization of the genes used for the co-evolution analysis. Genomic localization of the vi...
Avian opsin and melanin-based plumage coloration sequences. Accession numbers are indicated for the ...
Species-specific branch selection tests. The one-ratio model (H0) was tested against the two-ratios ...
Log GC ratio pairwise comparisons between the avian opsins. The presented p-values are corrected usi...
Mammalian opsin sequences. Accession number of the mammalian opsins sequences used for site selectio...
Avian sw2 and lw sequences. Accession number of the sw2 and lw sequences used for site selection ana...
Site-selection tests for the avian and mammalian opsins and the melanin-based coloration genes. The ...
UVS/VS condition for avian sw1 sequences. Avian sw1 sequences used in this study and the respective ...
Saturation analysis. The presence of saturation in base substitution for each of the gene alignment ...
Genomic data summary. (A) Proportion of total sequence data (144 million paired-end sequences) obtai...
Substitution rates of autosomal loci (A and C; y-axis unit is 10-9 per site per year) and ratios of ...
Phylogenetic trees of avian β-defensin and cathelicidin genes. Branches with evidence suggesting ep...
Phylogenetic trees of cyt b , ND2 and cyt b + ND2. Bayesian phylogenetic trees of ospreys construct...