Transcripts belonging to ABA-related genes and FUS3 regulon. Arabidopsis genes were obtained from [1, 51]. Mercator output for soybean transcripts was parsed to obtain potential Arabidopsis homologs. (A) These two datasets were cross-referenced to identify transcripts that were related to at least one of these regulators. (B) ABA-related transcripts; color-coding corresponds to standard assigned super-cluster colors. (XLSX 271 kb
Additional file 1: Table S1. Summary statistics of RNA-Seq results in seed development of Medicago s...
Table S4. List of genes upregulated in high (Conrad and AC Colombe) as compared with low (AC Glengar...
The lipid-related homologous genes in arabidopsis for the genes in QTL regions. (XLS 24 kb
Changes in transcript levels in developing soybean embryos. The set of 2,938 transcripts were cluste...
Summary of all information relevant to 2,938 transcripts. This file contains the following informati...
Distribution of 2,938 transcripts among the super-clusters. The graph shows the distribution of know...
RNA-Seq data and other computational analysis pipelines. The tools are shown in red, classifier spec...
Pearson correlations between sense and antisense transcript pairs. (A) All identified sense and anti...
Sense and antisense transcripts and primers chosen for validation of RNA-Seq-based expression level ...
GCR1 and CPK11 sub-networks. The nearest neighbors of the known and novel GCR1 and CPK11 SVs were vi...
Gene annotation and expression analysis of ABA synthesis and the response pathway. (XLSX 10 kb
Figure S2. M-A plot of log2 fold change as a function of average expression of gene. Significantly d...
Quantitative (qPCR) results for selected sense and antisense transcript pairs. qPCR was performed us...
Phylogenetic analysis of putative Glyma11g13220 homologs between soybean and Arabidopsis. (TIFF 7931...
Table S11. Genes annotated for transcriptional regulation and upregulated in âhigh isoflavonoidâ...
Additional file 1: Table S1. Summary statistics of RNA-Seq results in seed development of Medicago s...
Table S4. List of genes upregulated in high (Conrad and AC Colombe) as compared with low (AC Glengar...
The lipid-related homologous genes in arabidopsis for the genes in QTL regions. (XLS 24 kb
Changes in transcript levels in developing soybean embryos. The set of 2,938 transcripts were cluste...
Summary of all information relevant to 2,938 transcripts. This file contains the following informati...
Distribution of 2,938 transcripts among the super-clusters. The graph shows the distribution of know...
RNA-Seq data and other computational analysis pipelines. The tools are shown in red, classifier spec...
Pearson correlations between sense and antisense transcript pairs. (A) All identified sense and anti...
Sense and antisense transcripts and primers chosen for validation of RNA-Seq-based expression level ...
GCR1 and CPK11 sub-networks. The nearest neighbors of the known and novel GCR1 and CPK11 SVs were vi...
Gene annotation and expression analysis of ABA synthesis and the response pathway. (XLSX 10 kb
Figure S2. M-A plot of log2 fold change as a function of average expression of gene. Significantly d...
Quantitative (qPCR) results for selected sense and antisense transcript pairs. qPCR was performed us...
Phylogenetic analysis of putative Glyma11g13220 homologs between soybean and Arabidopsis. (TIFF 7931...
Table S11. Genes annotated for transcriptional regulation and upregulated in âhigh isoflavonoidâ...
Additional file 1: Table S1. Summary statistics of RNA-Seq results in seed development of Medicago s...
Table S4. List of genes upregulated in high (Conrad and AC Colombe) as compared with low (AC Glengar...
The lipid-related homologous genes in arabidopsis for the genes in QTL regions. (XLS 24 kb