Figure S2. M-A plot of log2 fold change as a function of average expression of gene. Significantly differentially expressed genes (FDR ≤ 0.001) are represented in red. Plots displayed for pair-wise comparisons (a) AC Glengarry with AC Colombe (b) AC Glengarry with Conrad (c) Pagoda with AC Colombe (d) Pagoda with Conrad. (PDF 493 kb
Relative gene expression of MIPS1, MRP-L, MRP-N. Fold change between 3mlpa and 3MWT at respective se...
Log 2 ratios and RPKM values of differentially expressed genes. Table of genes shown to be different...
Table S2. List of differentially expressed genes with more than 4-fold change between any two sample...
Figure S3. Gene frequency as a function of Benjamini-Hochberg adjusted p-values. Histogram of p-valu...
Table S4. List of genes upregulated in high (Conrad and AC Colombe) as compared with low (AC Glengar...
Table S3. List of genes downregulated in high (Conrad and AC Colombe) as compared with low (AC Gleng...
Table S10. Genes annotated with disease or stress response and upregulated in âhigh isoflavonoidâ...
Table S11. Genes annotated for transcriptional regulation and upregulated in âhigh isoflavonoidâ...
Table S7. Genes downregulated in âhigh isoflavonoidâ cultivars (104 genes) were analyzed for ove...
Table S6. Genes upregulated in âhigh isoflavonoidâ cultivars (138 genes) were analyzed for overr...
Multi-dimensional scaling plots of variance between samples from edgeR. Sample variance between ST77...
Table S3. GO terms identified in soybean HR (JL1i vs. JL1ni) and HS (KF1i vs. KF1ni). Note: A total ...
Defense related genes differentially expressed in early stages of seed development. Column âSâ r...
Expression levels of soybean predicted genes. Gene expression values are reported for all soybean pr...
Figure S4. Expression profile of secondary metabolism-related genes. Gene expression shows a higher ...
Relative gene expression of MIPS1, MRP-L, MRP-N. Fold change between 3mlpa and 3MWT at respective se...
Log 2 ratios and RPKM values of differentially expressed genes. Table of genes shown to be different...
Table S2. List of differentially expressed genes with more than 4-fold change between any two sample...
Figure S3. Gene frequency as a function of Benjamini-Hochberg adjusted p-values. Histogram of p-valu...
Table S4. List of genes upregulated in high (Conrad and AC Colombe) as compared with low (AC Glengar...
Table S3. List of genes downregulated in high (Conrad and AC Colombe) as compared with low (AC Gleng...
Table S10. Genes annotated with disease or stress response and upregulated in âhigh isoflavonoidâ...
Table S11. Genes annotated for transcriptional regulation and upregulated in âhigh isoflavonoidâ...
Table S7. Genes downregulated in âhigh isoflavonoidâ cultivars (104 genes) were analyzed for ove...
Table S6. Genes upregulated in âhigh isoflavonoidâ cultivars (138 genes) were analyzed for overr...
Multi-dimensional scaling plots of variance between samples from edgeR. Sample variance between ST77...
Table S3. GO terms identified in soybean HR (JL1i vs. JL1ni) and HS (KF1i vs. KF1ni). Note: A total ...
Defense related genes differentially expressed in early stages of seed development. Column âSâ r...
Expression levels of soybean predicted genes. Gene expression values are reported for all soybean pr...
Figure S4. Expression profile of secondary metabolism-related genes. Gene expression shows a higher ...
Relative gene expression of MIPS1, MRP-L, MRP-N. Fold change between 3mlpa and 3MWT at respective se...
Log 2 ratios and RPKM values of differentially expressed genes. Table of genes shown to be different...
Table S2. List of differentially expressed genes with more than 4-fold change between any two sample...