Heat map of all mapped traits across the murine genome. The QTL heat map for all members of the cluster tree, from mouse Chr 1 to distal Chr X. The more intense colors mark chromosomal regions with comparatively high linkage statistics and the spectrum encodes the allelic effect. Each individually colored line in the vertical column indicates the genome-wide p value computed on the basis of 5000 permutations (significant p values are indicated by colors at the right end of the spectrum). (TIFF 258 kb
Figure S1. Haplotype-based and broad-sense heritability estimates in CC mice. Figure S2. Phenotypic ...
Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...
Figure S1. Screening by Sanger sequencing of animals for the generation of a Syt7 conditional allele...
Colonization levels of 14 BXD strains tested from JAX and UC. The individual colonization levels of ...
Figure S2. Founder contributions and haplotype around Stsl3 QTL on Chr 1. (A) Genome scan magnificat...
Figure S3. Founder contributions and haplotype around Stsl4 QTL on Chr 6. (A) Genome scan magnificat...
Correction of mapping bias in RNA-Seq using strain specific genomic information. Figure S2. Volcano ...
Haplotype mapping for the albino trait using 38 CC lines. Plots show âlogP values (y-axis) accordi...
Schematic view of the sources of genetic variation identified in KO/KI congenic mice. First, the cho...
Table S1. Homozygous variants from a Sall2 +/â littermate used to crossvalidate the congenic footp...
Whole genome histogram of novel/existing variants in Gtf2ird1, Mecp2, Stc1, Itch, Sall2 and Hnrnpd/A...
Haplotype analysis to prioritize candidate genes for HDL QTL Hdlq17 on chromosome 9. Sanger SNP data...
Figure S2. Pax7EGFP copy number variation analysis and in-depth genotyping, and effect of transgene ...
Average genotype frequencies in the model with a constant environment. The frequencies are displayed...
Primers for microsatellite loci. Table S2: PCR and sequencing primers. Table S3: Allele frequencies ...
Figure S1. Haplotype-based and broad-sense heritability estimates in CC mice. Figure S2. Phenotypic ...
Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...
Figure S1. Screening by Sanger sequencing of animals for the generation of a Syt7 conditional allele...
Colonization levels of 14 BXD strains tested from JAX and UC. The individual colonization levels of ...
Figure S2. Founder contributions and haplotype around Stsl3 QTL on Chr 1. (A) Genome scan magnificat...
Figure S3. Founder contributions and haplotype around Stsl4 QTL on Chr 6. (A) Genome scan magnificat...
Correction of mapping bias in RNA-Seq using strain specific genomic information. Figure S2. Volcano ...
Haplotype mapping for the albino trait using 38 CC lines. Plots show âlogP values (y-axis) accordi...
Schematic view of the sources of genetic variation identified in KO/KI congenic mice. First, the cho...
Table S1. Homozygous variants from a Sall2 +/â littermate used to crossvalidate the congenic footp...
Whole genome histogram of novel/existing variants in Gtf2ird1, Mecp2, Stc1, Itch, Sall2 and Hnrnpd/A...
Haplotype analysis to prioritize candidate genes for HDL QTL Hdlq17 on chromosome 9. Sanger SNP data...
Figure S2. Pax7EGFP copy number variation analysis and in-depth genotyping, and effect of transgene ...
Average genotype frequencies in the model with a constant environment. The frequencies are displayed...
Primers for microsatellite loci. Table S2: PCR and sequencing primers. Table S3: Allele frequencies ...
Figure S1. Haplotype-based and broad-sense heritability estimates in CC mice. Figure S2. Phenotypic ...
Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...
Figure S1. Screening by Sanger sequencing of animals for the generation of a Syt7 conditional allele...