Colonization levels of 14 BXD strains tested from JAX and UC. The individual colonization levels of mice from the 14 BXD strains that were tested from both JAX and UC are depicted. Mice from JAX are shown as red squares and mice from UC are shown as black circles. The colonization levels from both sources overlap, which supports the finding that there was no difference in colonization level depending on the source of the mice, Additional file 2: Table S1. (TIFF 320 kb
p47 phox−/− mice do not spontaneously develop colitis. H&E staining of representative distal colon s...
Strain 33676 belongs to the Mexican ST213 population. The dendrogram depicts the genetic relationshi...
Supplementary figures and tables. Figure S1: Comparison of thresholds to retrieve the number of comm...
Heat map of all mapped traits across the murine genome. The QTL heat map for all members of the clus...
Figure S2. Founder contributions and haplotype around Stsl3 QTL on Chr 1. (A) Genome scan magnificat...
Figure S3. Founder contributions and haplotype around Stsl4 QTL on Chr 6. (A) Genome scan magnificat...
Schematic view of the sources of genetic variation identified in KO/KI congenic mice. First, the cho...
Table S1: Excluded GENCODE vM7 mouse genes. Table S2: EdgeR differential expression (N. stephensi ve...
Average genotype frequencies in the model with a constant environment. The frequencies are displayed...
Figure S1. Screening by Sanger sequencing of animals for the generation of a Syt7 conditional allele...
Correction of mapping bias in RNA-Seq using strain specific genomic information. Figure S2. Volcano ...
Genetic evidence for the diversified mcr-1-positive plasmids. Figure S2. Comparative genomics of the...
Primers for microsatellite loci. Table S2: PCR and sequencing primers. Table S3: Allele frequencies ...
Figure S2. Pax7EGFP copy number variation analysis and in-depth genotyping, and effect of transgene ...
Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...
p47 phox−/− mice do not spontaneously develop colitis. H&E staining of representative distal colon s...
Strain 33676 belongs to the Mexican ST213 population. The dendrogram depicts the genetic relationshi...
Supplementary figures and tables. Figure S1: Comparison of thresholds to retrieve the number of comm...
Heat map of all mapped traits across the murine genome. The QTL heat map for all members of the clus...
Figure S2. Founder contributions and haplotype around Stsl3 QTL on Chr 1. (A) Genome scan magnificat...
Figure S3. Founder contributions and haplotype around Stsl4 QTL on Chr 6. (A) Genome scan magnificat...
Schematic view of the sources of genetic variation identified in KO/KI congenic mice. First, the cho...
Table S1: Excluded GENCODE vM7 mouse genes. Table S2: EdgeR differential expression (N. stephensi ve...
Average genotype frequencies in the model with a constant environment. The frequencies are displayed...
Figure S1. Screening by Sanger sequencing of animals for the generation of a Syt7 conditional allele...
Correction of mapping bias in RNA-Seq using strain specific genomic information. Figure S2. Volcano ...
Genetic evidence for the diversified mcr-1-positive plasmids. Figure S2. Comparative genomics of the...
Primers for microsatellite loci. Table S2: PCR and sequencing primers. Table S3: Allele frequencies ...
Figure S2. Pax7EGFP copy number variation analysis and in-depth genotyping, and effect of transgene ...
Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...
p47 phox−/− mice do not spontaneously develop colitis. H&E staining of representative distal colon s...
Strain 33676 belongs to the Mexican ST213 population. The dendrogram depicts the genetic relationshi...
Supplementary figures and tables. Figure S1: Comparison of thresholds to retrieve the number of comm...