<p><b>A</b>. CHIKV genomic RNA diagram with the indicated conserved region targeted for viral suppression. The CHIKV conserved domain, labeled as the CHIKV Conserved Region, was determined through a Clustal X alignment of GenBank obtained CHIKV sequences (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0139899#sec011" target="_blank">Materials and Methods</a> and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0139899#pone.0139899.s005" target="_blank">S5 Fig</a>). <b>B</b>. The most invariant segments of the DENV RNA are known as the 5’ and 3’ cyclization sequences (labeled as the Group I Intron target site). These sequences are so named because they are complementary to each other and are th...
<p><b>(A)</b> Drawing above: sites used for insertion of EGFP into nsP1, nsP2 and nsP3 of CHIKV repl...
<p>A. Construction of a novel monocistronic DENV reporter system. At the top, schematic representati...
<p><b>(A)</b> Adaptive mutations and deletions were mapped on the RNA structure of the variable regi...
(A) Schematic representation (top) and nucleotide conservation plot (bottom) of the CHIKV complete g...
<p>(Exact location on CHIKV genome is depicted in <a href="http://www.plosntds.org/article/info:doi/...
<p>(<b>A</b>) Region of shRNA E1 target site (location: 10614–10632), (<b>B</b>) Region of shRNA nsP...
<p>Panel A provides a schematic representation of the DENV genome, divided into structural and nonst...
<p>Genome organization of chimeric CHIKV/SFV viruses. The different domains of E2 from SFV were inse...
<p>Continuous maintenance of CHIKV in shRNA E1 cell clones at the 15<sup>th</sup> (P15) and 50<sup>t...
<p>A ClustalW2 multiple alignment of 5′ (A) and 3′ (B) NTR sequences of the prototypic representativ...
Chikungunya virus (CHIKV) is a re-emerging, pathogenic Alphavirus transmitted to humans by Aedes spp...
<p><b>(A)</b> Sequence variation of residues 828–848 and 883–900 of DENV1–4 and representative flavi...
All plots represent the SNPs and variants found having the K164568 ECSA genotype reference genome. R...
Schematic representation of CHIKV populations during transmission. Blue and red circles represent wi...
<p><b>A</b>) Transcription of each reporter RNA is initiated from the baculovirus IE promoter (IE), ...
<p><b>(A)</b> Drawing above: sites used for insertion of EGFP into nsP1, nsP2 and nsP3 of CHIKV repl...
<p>A. Construction of a novel monocistronic DENV reporter system. At the top, schematic representati...
<p><b>(A)</b> Adaptive mutations and deletions were mapped on the RNA structure of the variable regi...
(A) Schematic representation (top) and nucleotide conservation plot (bottom) of the CHIKV complete g...
<p>(Exact location on CHIKV genome is depicted in <a href="http://www.plosntds.org/article/info:doi/...
<p>(<b>A</b>) Region of shRNA E1 target site (location: 10614–10632), (<b>B</b>) Region of shRNA nsP...
<p>Panel A provides a schematic representation of the DENV genome, divided into structural and nonst...
<p>Genome organization of chimeric CHIKV/SFV viruses. The different domains of E2 from SFV were inse...
<p>Continuous maintenance of CHIKV in shRNA E1 cell clones at the 15<sup>th</sup> (P15) and 50<sup>t...
<p>A ClustalW2 multiple alignment of 5′ (A) and 3′ (B) NTR sequences of the prototypic representativ...
Chikungunya virus (CHIKV) is a re-emerging, pathogenic Alphavirus transmitted to humans by Aedes spp...
<p><b>(A)</b> Sequence variation of residues 828–848 and 883–900 of DENV1–4 and representative flavi...
All plots represent the SNPs and variants found having the K164568 ECSA genotype reference genome. R...
Schematic representation of CHIKV populations during transmission. Blue and red circles represent wi...
<p><b>A</b>) Transcription of each reporter RNA is initiated from the baculovirus IE promoter (IE), ...
<p><b>(A)</b> Drawing above: sites used for insertion of EGFP into nsP1, nsP2 and nsP3 of CHIKV repl...
<p>A. Construction of a novel monocistronic DENV reporter system. At the top, schematic representati...
<p><b>(A)</b> Adaptive mutations and deletions were mapped on the RNA structure of the variable regi...