<p>Concatenated enrichment profiles for GO, C2, and TF gene set collections, similar to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0143563#pone.0143563.g003" target="_blank">Fig 3</a>, ordered by hierarchical clustering of Euclidean distance between rows. Rows have been normalized by dividing by the row sum for visualization, intensity is proportional to normalized enrichment. Heatmap is partitioned into groups A-E based on hierarchical clustering. Clusters A, B, and C are primarily involved in the immune response and are enriched in gene subsets that include more genes. Clusters D and E are predominantly related to developmental and transcriptional regulation processes.</p
<p>Hierarchical clustering of 183 breast tumor samples using the 500 most variant genes across all s...
<p>Heatmap representation of the hierarchical trees of pathways and differentially expressed genes i...
<p>(A) Based on annotation for bovine DGE profiles, we identified 138 unique cytokine genes and thei...
<p>(A) Hierarchical clustering of H1.5 enrichment levels in HGNC gene families is shown as a heat ma...
<p>Heatmaps displays the log2(M) on a color scale from green indicating lower expression to red indi...
<p>Analogous to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0...
<p>A two–way clustering of normalized 454 sequence count data using Ward’s hierarchical cluster algo...
<p>Hierarchical clustering of the osteosarcoma cell lines based on the expression level of the 350 g...
<p>Each node represents one GO term. The thickness of the edges represents the number of genes share...
<p>Hierarchical clustering of gene expression profiles in all samples. Each row represents a gene an...
<p>As in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0083109-...
<p>Gene expression levels of (A) PGC signature, (B) EGC and common PGC/EGC signature and (C) ESC, IP...
1<p>Differentially expressed genes were clustered using GO BP terms semantic similarity between gene...
<p>Hierarchical clustering was performed using gene expression data of 597 differentially expressed ...
<p>(A) hierarchical clustering of N group (DS: D11–D15 versus control: C16–C22) based on the 174 dys...
<p>Hierarchical clustering of 183 breast tumor samples using the 500 most variant genes across all s...
<p>Heatmap representation of the hierarchical trees of pathways and differentially expressed genes i...
<p>(A) Based on annotation for bovine DGE profiles, we identified 138 unique cytokine genes and thei...
<p>(A) Hierarchical clustering of H1.5 enrichment levels in HGNC gene families is shown as a heat ma...
<p>Heatmaps displays the log2(M) on a color scale from green indicating lower expression to red indi...
<p>Analogous to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0...
<p>A two–way clustering of normalized 454 sequence count data using Ward’s hierarchical cluster algo...
<p>Hierarchical clustering of the osteosarcoma cell lines based on the expression level of the 350 g...
<p>Each node represents one GO term. The thickness of the edges represents the number of genes share...
<p>Hierarchical clustering of gene expression profiles in all samples. Each row represents a gene an...
<p>As in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0083109-...
<p>Gene expression levels of (A) PGC signature, (B) EGC and common PGC/EGC signature and (C) ESC, IP...
1<p>Differentially expressed genes were clustered using GO BP terms semantic similarity between gene...
<p>Hierarchical clustering was performed using gene expression data of 597 differentially expressed ...
<p>(A) hierarchical clustering of N group (DS: D11–D15 versus control: C16–C22) based on the 174 dys...
<p>Hierarchical clustering of 183 breast tumor samples using the 500 most variant genes across all s...
<p>Heatmap representation of the hierarchical trees of pathways and differentially expressed genes i...
<p>(A) Based on annotation for bovine DGE profiles, we identified 138 unique cytokine genes and thei...