Genes changed >3-fold with BRG1/BRM knockdown. Table S2 Shared genes controlled by both BAF and p63 with fold changeâ>â3. Table S3 Sequencing depth of the ATAC-seq, RNA-seq, and ChIP-seq data generated for this study. (XLSX 78 kb
Figure S2. EGFR signaling modulates chromatin at activated and repressed genes. IGB browser views of...
Fig. S1 fRIP-Seq optimization. Fig. S2 The effect of transcript localization on reassociation and fR...
Figure S1. FastQC Reveals Tn5 Tags and PCR Chimerism. Non-random distributions of the first ~â10 b...
Includes the supplementary Figures S1–4. Figure S1. BAF is essential for epidermal gene induction. (...
Table S5.ATAC-seq peaks significantly differentially enriched (DESSeq2 nominal p < 0.2) in isolated ...
Table S1. Detailed sequence analysis information for ATAC-seq sequence reads. (DOCX 68Â kb
BACS used for selected PE-4Cseq and chromatin decompaction regions. a) Location of BACs used in 3D D...
Table S16. Transcripts within 10 kb of ATAC-seq differential peaks. Column 1: Peak name: Peak number...
Table S1. Identified enhancers using K562 GRO-seq (S1a), GM12878 GRO-seq (S1b), two replicates of U2...
Figure S3. Visual inspection reveals consistent overlap between HOMER peaks and OCRs at peak size of...
Table S1. The brief introduction of two cell lines. Table S2. Transcription factors associated with ...
Figure S1. Enrichment of histone modification ChIP-seq signals pooled from all sampled in (A) transc...
Table S1. Coordinates of the exons of human BRAF analyzed in this study. Table S2. List of the human...
The complete set of all genes included in the metagenes for each of the putative driver genes listed...
Table S8. Peaks cloned into EpGFPII and injected into S. purpuratus eggs. Column 1: ATAC Peak Name: ...
Figure S2. EGFR signaling modulates chromatin at activated and repressed genes. IGB browser views of...
Fig. S1 fRIP-Seq optimization. Fig. S2 The effect of transcript localization on reassociation and fR...
Figure S1. FastQC Reveals Tn5 Tags and PCR Chimerism. Non-random distributions of the first ~â10 b...
Includes the supplementary Figures S1–4. Figure S1. BAF is essential for epidermal gene induction. (...
Table S5.ATAC-seq peaks significantly differentially enriched (DESSeq2 nominal p < 0.2) in isolated ...
Table S1. Detailed sequence analysis information for ATAC-seq sequence reads. (DOCX 68Â kb
BACS used for selected PE-4Cseq and chromatin decompaction regions. a) Location of BACs used in 3D D...
Table S16. Transcripts within 10 kb of ATAC-seq differential peaks. Column 1: Peak name: Peak number...
Table S1. Identified enhancers using K562 GRO-seq (S1a), GM12878 GRO-seq (S1b), two replicates of U2...
Figure S3. Visual inspection reveals consistent overlap between HOMER peaks and OCRs at peak size of...
Table S1. The brief introduction of two cell lines. Table S2. Transcription factors associated with ...
Figure S1. Enrichment of histone modification ChIP-seq signals pooled from all sampled in (A) transc...
Table S1. Coordinates of the exons of human BRAF analyzed in this study. Table S2. List of the human...
The complete set of all genes included in the metagenes for each of the putative driver genes listed...
Table S8. Peaks cloned into EpGFPII and injected into S. purpuratus eggs. Column 1: ATAC Peak Name: ...
Figure S2. EGFR signaling modulates chromatin at activated and repressed genes. IGB browser views of...
Fig. S1 fRIP-Seq optimization. Fig. S2 The effect of transcript localization on reassociation and fR...
Figure S1. FastQC Reveals Tn5 Tags and PCR Chimerism. Non-random distributions of the first ~â10 b...