List of genes with significant differential expression between FCB and 106/1 in a stage-specific manner. Genes with significantly higher expression displayed absolute fold changes >1.5 and normalized fold changes values two standard deviations above the median normalized fold change value. Genes with significantly lower expression had absolute fold change values lower than 0.6 and a normalized fold change three standard deviations below the median value. Fold change for each gene at the designated stage is indicated. (XLSX 66 kb
Hierarchical clustering, which was performed using Pearson correlation coefficients between ~2600 ge...
Assessment of a possible time shift in gene expression between parasite lines. We examined the data ...
Genomic map of the pfmdr1-containing amplicon region on chromosome 5 of the FCB strain. Genes listed...
Genes with significant differential expression between 7G8 pfcrt_CTL and 7G8 pfcrt_T76K in a stage-s...
List of genes with significant differential expression between FCB and FCB pfmdr1_3â˛KD in a stage-...
Venn diagrams depicting the number of genes that were found differentially expressed between FCB and...
Genes (A-F, I-K) and gene sets (G-H, L-M) differentially expressed in the pfcrt data set. For each p...
Genes (A-D) and gene sets (E-H) differentially expressed in the pfmdr1 data set. For each pairwise c...
List of genes within the pfmdr1-containing amplicon with associated fold change between FCB and both...
Gene set enrichment analysis for the FCB pfmdr1_3′KD vs 106/1 pairwise comparison. Gene sets that ar...
Identification of genes whose expression is strongly correlated to that of both pfcrt and pfmr1. PCC...
Gene expression correlation between P. falciparum genes and either pfcrt or pfmdr1. Pearson correlat...
Cluster heatmap of gene expression data for pfcrt/pfmdr1 and all other genes. The hierarchical clust...
Cluster 2 from the Hierarchical clustering, corresponds to another group of gene pairs with high Pea...
Results of quantitative real time PCR to estimate gene copy numbers associated with gene expression ...
Hierarchical clustering, which was performed using Pearson correlation coefficients between ~2600 ge...
Assessment of a possible time shift in gene expression between parasite lines. We examined the data ...
Genomic map of the pfmdr1-containing amplicon region on chromosome 5 of the FCB strain. Genes listed...
Genes with significant differential expression between 7G8 pfcrt_CTL and 7G8 pfcrt_T76K in a stage-s...
List of genes with significant differential expression between FCB and FCB pfmdr1_3â˛KD in a stage-...
Venn diagrams depicting the number of genes that were found differentially expressed between FCB and...
Genes (A-F, I-K) and gene sets (G-H, L-M) differentially expressed in the pfcrt data set. For each p...
Genes (A-D) and gene sets (E-H) differentially expressed in the pfmdr1 data set. For each pairwise c...
List of genes within the pfmdr1-containing amplicon with associated fold change between FCB and both...
Gene set enrichment analysis for the FCB pfmdr1_3′KD vs 106/1 pairwise comparison. Gene sets that ar...
Identification of genes whose expression is strongly correlated to that of both pfcrt and pfmr1. PCC...
Gene expression correlation between P. falciparum genes and either pfcrt or pfmdr1. Pearson correlat...
Cluster heatmap of gene expression data for pfcrt/pfmdr1 and all other genes. The hierarchical clust...
Cluster 2 from the Hierarchical clustering, corresponds to another group of gene pairs with high Pea...
Results of quantitative real time PCR to estimate gene copy numbers associated with gene expression ...
Hierarchical clustering, which was performed using Pearson correlation coefficients between ~2600 ge...
Assessment of a possible time shift in gene expression between parasite lines. We examined the data ...
Genomic map of the pfmdr1-containing amplicon region on chromosome 5 of the FCB strain. Genes listed...