Relationship between 3â˛UTR (untranslated regoin) size and TIN score for 12 Glioblastoma (GBM) samples. (a)-(c) three samples with RIN value of 10; (d)-(e), two samples with RIN value of 8; (f)-(h) three samples with RIN value of 6; (i)-(k) three samples with RIN value of 4; (l) one sample with RIN value of 2. r, Pearson correlation coefficient. r, Pearson correlation coefficient. Linear regression lines fitted to data are indicated as black dashed lines. (PDF 7201 kb
Scatter plots of gene expression values between samples. A figure illustrating how similar of genes ...
Figure S2. A Venn diagram showing the accuracy in querying human transcriptomic k-mers totaling 120,...
Impact on rank performance by read depth and sample number. Rank precision and rank recall, averaged...
Barplot showing Pearson correlation coefficients between TIN and RNA fragment size. 12 Glioblastoma ...
Smoothed scatter plots showing correlation between TIN score and transcript size. (a)-(c) three samp...
Dependency between FPKM (y-axis) and TIN scores (x-axis) for 20 mCRPC samples. (a)-(j) 10 high RIN/m...
Relationship between expression fold change measured by log2 (FPKM) and TIN fold change. (a) mCRPC d...
120 RNA-seq datasets generated from clinical tissues of human metastatic castration resistant prosta...
RIN (RNA integrity number) score distribution for 120 metastatic castration resistant prostate cance...
Prognostic significance of CCL22 − IL2RB − IRF4 in validation datasets. (A) Distributions of average...
Twenty RNA-seq datasets generated from human peripheral blood mononuclear cell (PBMC)1. Accession nu...
Venn diagram showing the overlapping between 665 DEGs (before TIN correction) and 289 DEGs (after TI...
Table S1. This table summarizes the number of false positives claimed in differential expression ana...
Correlation RIN BioAnalyzer vs MultiNA. RIN values as measured by the Bioanalyzer (Agilent) were com...
Spearmanâs correlation to RT-qPCR data of 30 genes. Correlation coefficients (x-axis) of 30 genes ...
Scatter plots of gene expression values between samples. A figure illustrating how similar of genes ...
Figure S2. A Venn diagram showing the accuracy in querying human transcriptomic k-mers totaling 120,...
Impact on rank performance by read depth and sample number. Rank precision and rank recall, averaged...
Barplot showing Pearson correlation coefficients between TIN and RNA fragment size. 12 Glioblastoma ...
Smoothed scatter plots showing correlation between TIN score and transcript size. (a)-(c) three samp...
Dependency between FPKM (y-axis) and TIN scores (x-axis) for 20 mCRPC samples. (a)-(j) 10 high RIN/m...
Relationship between expression fold change measured by log2 (FPKM) and TIN fold change. (a) mCRPC d...
120 RNA-seq datasets generated from clinical tissues of human metastatic castration resistant prosta...
RIN (RNA integrity number) score distribution for 120 metastatic castration resistant prostate cance...
Prognostic significance of CCL22 − IL2RB − IRF4 in validation datasets. (A) Distributions of average...
Twenty RNA-seq datasets generated from human peripheral blood mononuclear cell (PBMC)1. Accession nu...
Venn diagram showing the overlapping between 665 DEGs (before TIN correction) and 289 DEGs (after TI...
Table S1. This table summarizes the number of false positives claimed in differential expression ana...
Correlation RIN BioAnalyzer vs MultiNA. RIN values as measured by the Bioanalyzer (Agilent) were com...
Spearmanâs correlation to RT-qPCR data of 30 genes. Correlation coefficients (x-axis) of 30 genes ...
Scatter plots of gene expression values between samples. A figure illustrating how similar of genes ...
Figure S2. A Venn diagram showing the accuracy in querying human transcriptomic k-mers totaling 120,...
Impact on rank performance by read depth and sample number. Rank precision and rank recall, averaged...