Over-represented Gene Ontology Biological Process (GOBP) terms that are completelydown-regulated. Data refer to GOBP terms that can be found in various intestinal sections. The following details are provided for each GOBP term: total number of genes in the microarray (gene set size, labelled as Set size), count of genes extracted with our analysis (observed hits, labelled as Hits), and adjusted p-values. Intestine sections: Prox = proximal; Mid = middle; Dist = distal. Response types: lm = linear; log = logarithm; exp = exponential. (PDF 204 kb
Gene ontology (GO) enrichment analysis for endocrine cell subtypes. Left. Bar plot displaying the nu...
Inflammatory and metabolic profiling in control and STAT mice. Serum was collected at 32 weeks for a...
Figure S2. Impact of experimental feedings and microbial colonization on mouse metabolism. a Body we...
Over-represented Gene Ontology Biological Process (GOBP) terms that are completely up-regulated. For...
Over-represented Gene Ontology Biological Process (GOBP) terms associated with differentially expres...
Count of genes that responded in a significant, dose-dependent way to fat intake (model selection ba...
Genes affected by high-fat diet at different time points in the colon tissue of C57BL/6N mice. Log2 ...
Table S2. List of microbial genes differentially expressed in the cecum of mice fed high-fat diets s...
Table A1.1. Diet composition. Main ingredients are in bold (e.g., palm oil is the main source of sat...
Biological processes associated with high-fat diet-responsive genes at different time points in the ...
Rarefaction curve based on gene profiles of the total set of 54 samples. The rarefaction curves show...
Gene ontology (GO) analysis of the co-expressed genes in different selected groups from Fig. 3. (XLS...
Table S1. OTU-table based on high-throughput 16S rRNA amplicon analysis. Data were obtained and anal...
Relative abundance of KOs in relation to mouse strain and diet. Most of the annotated KOs is involve...
Gene expression data of small intestinal epithelial cells from germ-free (GF) and conventionally rai...
Gene ontology (GO) enrichment analysis for endocrine cell subtypes. Left. Bar plot displaying the nu...
Inflammatory and metabolic profiling in control and STAT mice. Serum was collected at 32 weeks for a...
Figure S2. Impact of experimental feedings and microbial colonization on mouse metabolism. a Body we...
Over-represented Gene Ontology Biological Process (GOBP) terms that are completely up-regulated. For...
Over-represented Gene Ontology Biological Process (GOBP) terms associated with differentially expres...
Count of genes that responded in a significant, dose-dependent way to fat intake (model selection ba...
Genes affected by high-fat diet at different time points in the colon tissue of C57BL/6N mice. Log2 ...
Table S2. List of microbial genes differentially expressed in the cecum of mice fed high-fat diets s...
Table A1.1. Diet composition. Main ingredients are in bold (e.g., palm oil is the main source of sat...
Biological processes associated with high-fat diet-responsive genes at different time points in the ...
Rarefaction curve based on gene profiles of the total set of 54 samples. The rarefaction curves show...
Gene ontology (GO) analysis of the co-expressed genes in different selected groups from Fig. 3. (XLS...
Table S1. OTU-table based on high-throughput 16S rRNA amplicon analysis. Data were obtained and anal...
Relative abundance of KOs in relation to mouse strain and diet. Most of the annotated KOs is involve...
Gene expression data of small intestinal epithelial cells from germ-free (GF) and conventionally rai...
Gene ontology (GO) enrichment analysis for endocrine cell subtypes. Left. Bar plot displaying the nu...
Inflammatory and metabolic profiling in control and STAT mice. Serum was collected at 32 weeks for a...
Figure S2. Impact of experimental feedings and microbial colonization on mouse metabolism. a Body we...