Performance assessment of single-cell RNA-seq data. Histograms of A singlecell frequencies in the number of generated RNA-seq reads per cell, B uniquely mapped reads, C exonic regional coverage rate, and D detected number of genes per cell. Dashed red lines indicate the mean of the x-axis values. Using filtering criteria of >1Â M reads per cell, >60Â % uniquely mapped rate, >35Â % exonic region coverage rate, and >5000 detected genes, two single cells were not included in subsequent analysis (for details, see Additional file 7: Table S3). (PDF 345 kb
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Sequencing statistics for bulk cells and single-cell RNA-seq. Mapping information (to the hg19 genom...
Correlation of drug sensitivity with the targeted pathways in classified subpopulations. The classif...
Results of drug screening for pRCC and mRCC tumors. Summarized list of drugs used in the screening a...
Activity of druggable pathways of pRCC and mRCC cells in the PCA plot. The plots show heterogeneous ...
Overview of single cell RNA sequencing datasets. (A) Total number of cells per dataset. (B) Number o...
Recapitulation of poor response to pazopanib and everolimus in the patient through in vitro drug eff...
Figure S3. Quality metrics for single-cell RNA sequencing. A Total gene number of cells maintained i...
Additional file 1: Table S1. Basic information of sample cohort. Table S2. Data quality control metr...
Table S4. Single-cell library statistics computed from raw paired-end sequencing reads for mESCs and...
Overview of single-cell sequencing samples and sequencing statistics. An overview of general sequenc...
Control dataset sample identification, protocol information, and RNA sequencing stats. Experimental ...
Table S5. Single-cell library statistics computed from randomly downsampled 1 million paired-end seq...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Sequencing statistics for bulk cells and single-cell RNA-seq. Mapping information (to the hg19 genom...
Correlation of drug sensitivity with the targeted pathways in classified subpopulations. The classif...
Results of drug screening for pRCC and mRCC tumors. Summarized list of drugs used in the screening a...
Activity of druggable pathways of pRCC and mRCC cells in the PCA plot. The plots show heterogeneous ...
Overview of single cell RNA sequencing datasets. (A) Total number of cells per dataset. (B) Number o...
Recapitulation of poor response to pazopanib and everolimus in the patient through in vitro drug eff...
Figure S3. Quality metrics for single-cell RNA sequencing. A Total gene number of cells maintained i...
Additional file 1: Table S1. Basic information of sample cohort. Table S2. Data quality control metr...
Table S4. Single-cell library statistics computed from raw paired-end sequencing reads for mESCs and...
Overview of single-cell sequencing samples and sequencing statistics. An overview of general sequenc...
Control dataset sample identification, protocol information, and RNA sequencing stats. Experimental ...
Table S5. Single-cell library statistics computed from randomly downsampled 1 million paired-end seq...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...
Clear cell renal cell carcinoma (ccRCC) comprises more than 80% of all renal cancers and when metast...