Additional file 8: Table S4. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Additional file 6: of Physiological and transcriptional analyses of developmental stages along sugarcane leaf

Lucia Mattiello (345378)
Diego Riaño-Pachón (3430481)
Marina Martins (3430472)
Larissa da Cruz (3430469)
Denis Bassi (3430457)
Paulo Marchiori (3430463)
Rafael Ribeiro (3430466)
Mônica Labate (3430484)
Carlos Labate (3430451)
Marcelo Menossi (25694)

December 2015

Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...

Image_2_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.PDF

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 8: Table S24. of Association of variation in the sugarcane transcriptome with sugar content

Prathima Thirugnanasambandam (4041584)
Nam Hoang (4041575)
Agnelo Furtado (1823)
Frederick Botha (4616092)
Robert Henry (108785)

November 2017

Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...

Additional file 9: Table S5. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

Estimated insertion time of full length retrotransposons in Bru1 locus of LA Purple (S. officinarum)...

Additional file 4: Figure S2. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

Mauve visualization of local collinear blocks identified among 14 haplotypes (15BACs) from Saccharum...

Additional file 11: Figure S5. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

Phylogenetic analysis of 14 haplotypes of genes 11 from Saccharum species, and its homologs from sor...

Additional file 1: Table S1. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

The sequences of primers used for probe preparation for the BAC library screening. (DOCX 15Â kb

Additional file 7: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Heatmap of the expression levels of SsFRK gene family members under Et treatment. SR: S. robustum Mo...

Additional file 3: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...

Table_4_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Table_3_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Table_1_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Table_2_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 5: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

A RT-qPCR verification of SWEET2b and SWEET4b in partial tissues of two Saccharum species. Note: IN,...

Image_1_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.PDF

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 6: of Physiological and transcriptional analyses of developmental stages along sugarcane leaf

Lucia Mattiello (345378)
Diego Riaño-Pachón (3430481)
Marina Martins (3430472)
Larissa da Cruz (3430469)
Denis Bassi (3430457)
Paulo Marchiori (3430463)
Rafael Ribeiro (3430466)
Mônica Labate (3430484)
Carlos Labate (3430451)
Marcelo Menossi (25694)

December 2015

Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...

Image_2_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.PDF

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 8: Table S24. of Association of variation in the sugarcane transcriptome with sugar content

Prathima Thirugnanasambandam (4041584)
Nam Hoang (4041575)
Agnelo Furtado (1823)
Frederick Botha (4616092)
Robert Henry (108785)

November 2017

Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...

Additional file 9: Table S5. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

Estimated insertion time of full length retrotransposons in Bru1 locus of LA Purple (S. officinarum)...

Additional file 4: Figure S2. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

Mauve visualization of local collinear blocks identified among 14 haplotypes (15BACs) from Saccharum...

Additional file 11: Figure S5. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

Phylogenetic analysis of 14 haplotypes of genes 11 from Saccharum species, and its homologs from sor...

Additional file 1: Table S1. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Jisen Zhang (3445649)
Anupma Sharma (257041)
Qingyi Yu (734375)
Jianping Wang (215292)
Leiting Li (3445646)
Lin Zhu (192179)
Xingtan Zhang (694798)
Youqiang Chen (1544623)
Ray Ming (591215)

June 2016

The sequences of primers used for probe preparation for the BAC library screening. (DOCX 15Â kb

Additional file 7: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Heatmap of the expression levels of SsFRK gene family members under Et treatment. SR: S. robustum Mo...

Additional file 3: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...

Table_4_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Table_3_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Table_1_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Table_2_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.XLSX

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 5: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

A RT-qPCR verification of SWEET2b and SWEET4b in partial tissues of two Saccharum species. Note: IN,...

Image_1_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.PDF

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 6: of Physiological and transcriptional analyses of developmental stages along sugarcane leaf

Lucia Mattiello (345378)
Diego Riaño-Pachón (3430481)
Marina Martins (3430472)
Larissa da Cruz (3430469)
Denis Bassi (3430457)
Paulo Marchiori (3430463)
Rafael Ribeiro (3430466)
Mônica Labate (3430484)
Carlos Labate (3430451)
Marcelo Menossi (25694)

December 2015

Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...

Image_2_Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.PDF

Anupma Sharma (257041)
Jinjin Song (5786009)
Qingfan Lin (5786012)
Ratnesh Singh (3584645)
Ninfa Ramos (4638547)
Kai Wang (21246)
Jisen Zhang (3445649)
Ray Ming (591215)
Qingyi Yu (734375)

September 2018

Sugarcane (Saccharum spp. hybrids) is an economically important crop widely grown in tropical and su...

Additional file 8: Table S24. of Association of variation in the sugarcane transcriptome with sugar content

Prathima Thirugnanasambandam (4041584)
Nam Hoang (4041575)
Agnelo Furtado (1823)
Frederick Botha (4616092)
Robert Henry (108785)

November 2017

Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...

Additional file 8: Table S4. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Abstract

Extracted data

Additional file 8: Table S4. of Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum

Abstract

Extracted data

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