Additional file 1: of Identification of source and sink populations for the emergence and global spread of the East-Asia clone of community-associated MRSA

Supplementary figures and table of isolates. Figure S1. Global distribution of reported ST59 isolates and sequencing in our study. Figure S2. Spatiotemporal distribution of CC59 sequences in this study. Figure S3. Maximum likelihood phylogeny of global CC59 sequences from humans. Figure S4. BEAST maximum clade credibility tree of global human CC59 sequences from humans. Figure S5. Posterior probabilities for ancestral location of USA-associated clade in subsampled runs. Figure S6. Posterior probabilities for ancestral location of East Asia-associated clade in subsampled runs. Figure S7. Bayes factors indicating support for links between countries in a symmetric BSSVS phylogeography analysis. Figure S8. Skyride plots for subsampled runs. Figure S9. Heatmaps of median number of transitions between countries for subsampled runs. Figure S10. Presence or absence of accessory genes amongst global CC59 isolates. Figure S11. Root-to-tip distance plot for RAxML phylogeny of S. aureus CC59 sequences. Table S1. 120 ST59 isolates included in phylogenetic analysis. (DOCX 1792 kb