Mutant alleles and quality statistics of the MethylC-seq data produced in this study. Reads from our MethylC-seq dataset cover more than 96Â % of all cytosines in the genome with a roughly 25-fold coverage. (PDF 48 kb
Number of experiments achievable per DBS by different methods. Part of a DBS necessary to meet the m...
The sequenced and mapped reads in the m6A-seq, mRNA-seq, and input RNA-seq samples. (DOC 43 kb
Description of MCC-Seq capture panel. This file contains: (1) summary of CpGs and genomic regions ta...
Validation of MethylC-seq data using biological replicates of key genotypes. Analyses of biological ...
Results and Methods. Detailed Results, Methods, Figure Legends, and References to support the Supple...
Primer sequences used in this report. Primer sequences for single-locus bisulfite sequencing perform...
Genome-wide distribution of TE CG and CHG methylation. Heatmap showing CG and CHG methylation for th...
This file details for each cell type mean fold coverage (for CpG methylation sequencing) and total a...
Differentially expressed probes between EA and OA stimulated cells. Table S2. Genes differentially e...
DNA methylation profiles at differentially expressed gene flanking regions. Methylation levels in ea...
Allelic methylation in enhancer peaks. In this file, we report the ChromHMM bin and the allele-sepci...
MultiQC report in html format reporting general statistics from the Bismark alignment process for al...
Statistics of RNA-seq data. Table S2. List of differentially expressed genes in the pkl mutant ident...
Additional file 4. Summary statistics of Summary-based Mendelian Randomisation with gene expression ...
The methylation status of the five CpG sites in the GEO dataset and normal CD4+ and CD8+ T cells. Ta...
Number of experiments achievable per DBS by different methods. Part of a DBS necessary to meet the m...
The sequenced and mapped reads in the m6A-seq, mRNA-seq, and input RNA-seq samples. (DOC 43 kb
Description of MCC-Seq capture panel. This file contains: (1) summary of CpGs and genomic regions ta...
Validation of MethylC-seq data using biological replicates of key genotypes. Analyses of biological ...
Results and Methods. Detailed Results, Methods, Figure Legends, and References to support the Supple...
Primer sequences used in this report. Primer sequences for single-locus bisulfite sequencing perform...
Genome-wide distribution of TE CG and CHG methylation. Heatmap showing CG and CHG methylation for th...
This file details for each cell type mean fold coverage (for CpG methylation sequencing) and total a...
Differentially expressed probes between EA and OA stimulated cells. Table S2. Genes differentially e...
DNA methylation profiles at differentially expressed gene flanking regions. Methylation levels in ea...
Allelic methylation in enhancer peaks. In this file, we report the ChromHMM bin and the allele-sepci...
MultiQC report in html format reporting general statistics from the Bismark alignment process for al...
Statistics of RNA-seq data. Table S2. List of differentially expressed genes in the pkl mutant ident...
Additional file 4. Summary statistics of Summary-based Mendelian Randomisation with gene expression ...
The methylation status of the five CpG sites in the GEO dataset and normal CD4+ and CD8+ T cells. Ta...
Number of experiments achievable per DBS by different methods. Part of a DBS necessary to meet the m...
The sequenced and mapped reads in the m6A-seq, mRNA-seq, and input RNA-seq samples. (DOC 43 kb
Description of MCC-Seq capture panel. This file contains: (1) summary of CpGs and genomic regions ta...