Publication date
October 2016
DOIAbstract
R scripts and supplementary files for processing the BAMM analyses of the constant rate and diversity-dependent simulations. Please contact Jonathan S. Mitchell with questions about these files
R scripts and supplementary files for processing the BAMM analyses of the constant rate and diversity-dependent simulations. Please contact Jonathan S. Mitchell with questions about these files
This file contains the scripts of simulations used in the study, and R functions for the constructio...
File contents: 1: Two BEAST input files for phylogenetic reconstructions; 2: input file, settings fi...
Zip file containing 5 R scripts for performing function-valued ancestral curve reconstruction, and a...
This R script generates input files for the BAMM analyses conducted in this study
This R script analyzes the BAMM output generated by this study and includes code for generating the ...
Constant-rate simulated phylogenies analyzed with two different versions of BAMM under many differen...
Script used in the R program BAMMtools for the analysis and visualization of lineage diversification...
This file contains R Scripts used to analyze the ddRAD-Seq and RNA-Seq portions of this study
Files used in diversification analyses in Revbayes and BAMM, including Revbayes and R scripts and su...
Set of R scripts to randomly sample the genome using a fasta index file. See Readme file for more de...
This .zip file contains various R scripts used in our analyses. Included is a readme file that descr...
Scripts for Sliding Semilandmarks, Model fitting analyzes and BAMM analyzes of evolutionary phenotyp...
These scripts were used to test for isolation by distance and the effect of urbanization on genetic ...
Zipped archive of R scripts for simulation of samples and for analysis of simulated sample
The analyses by Van Bocxlaer & Hunt were performed in the free software environment R (www.r-project...
This file contains the scripts of simulations used in the study, and R functions for the constructio...
File contents: 1: Two BEAST input files for phylogenetic reconstructions; 2: input file, settings fi...
Zip file containing 5 R scripts for performing function-valued ancestral curve reconstruction, and a...
This R script generates input files for the BAMM analyses conducted in this study
This R script analyzes the BAMM output generated by this study and includes code for generating the ...
Constant-rate simulated phylogenies analyzed with two different versions of BAMM under many differen...
Script used in the R program BAMMtools for the analysis and visualization of lineage diversification...
This file contains R Scripts used to analyze the ddRAD-Seq and RNA-Seq portions of this study
Files used in diversification analyses in Revbayes and BAMM, including Revbayes and R scripts and su...
Set of R scripts to randomly sample the genome using a fasta index file. See Readme file for more de...
This .zip file contains various R scripts used in our analyses. Included is a readme file that descr...
Scripts for Sliding Semilandmarks, Model fitting analyzes and BAMM analyzes of evolutionary phenotyp...
These scripts were used to test for isolation by distance and the effect of urbanization on genetic ...
Zipped archive of R scripts for simulation of samples and for analysis of simulated sample
The analyses by Van Bocxlaer & Hunt were performed in the free software environment R (www.r-project...
This file contains the scripts of simulations used in the study, and R functions for the constructio...
File contents: 1: Two BEAST input files for phylogenetic reconstructions; 2: input file, settings fi...
Zip file containing 5 R scripts for performing function-valued ancestral curve reconstruction, and a...
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