Additional file 5: Figure S2. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Additional file 2: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Sequences of Cattle LncRNAs. A fasta file containing all the lncRNA sequences from cattle. (FA 14461...

Table_5_Characterization of lncRNA–miRNA–mRNA Network to Reveal Potential Functional ceRNAs in Bovine Skeletal Muscle.XLSX

Binglin Yue (6382244)
Hui Li (32376)
Mei Liu (41760)
Jiyao Wu (6382247)
Mingxun Li (513458)
Chuzhao Lei (513461)
Bizhi Huang (6382250)
Hong Chen (108084)

February 2019

There is growing evidence that non-coding RNAs are emerging as critical regulators of skeletal muscl...

Additional file 13: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Expression of Pig LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries per ti...

Additional file 4: Table S3. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

List of differentially expressed lncRNAs from four skeletal muscle developmental stages. (XLSX 122 k...

Additional file 3: Figure S1. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

Chromosome distribution of lncRNAs identified in goat skeletal muscle. (TIF 120 kb

Additional file 6: Table S4. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

Protein-coding genes detected 10-kb upstream and downstream of the differentially expressed lncRNAs....

Additional file 9: Table S7. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

Functional enrichment analysis of protein-coding genes co-expressed with lncRNAs. (XLSX 160 kb

Identification and Characterization of lncRNAs Expression Profile Related to Goat Skeletal Muscle at Different Development Stages

Haiyin Han
Xianwei Wang
Wentao Li
Jiannan Liu
Yekai Fan
Hui Zhang
Junqi Yang
Yahui Gao
Yufang Liu

October 2022

LncRNAs are essential for regulating skeletal muscle. However, the expression profile and function o...

Additional file 5: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

Functional enrichment analysis of the protein-coding genes of lncRNAs in cis. (XLS 360Â kb

Additional file 20: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Conserved LncRNAs. The 39 groups of orthologous genes across all five species are listed with the as...

Additional file 7: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

Functional enrichment analysis of protein-coding genes of lncRNAs in trans. (XLS 7903Â kb

Additional file 4: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

The protein-coding genes within 10 k and 100Â k upstream and downstream of an lncRNA. (XLSX 55Â kb

Additional file 5: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Exon Locations of Cattle LncRNAs. The genomic locations of the exons of all cattle lncRNAs. (GTF 435...

Additional file 2: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

Comparison of TE components between individual subtypes of lncRNAs and mRNAs. (XLSX 17Â kb

Additional file 1: of Filtered reproductive long non-coding RNAs by genome-wide analyses of goat ovary at different estrus periods

Yong Liu (6908)
Bing Qi (492962)
Juan Xie (461923)
Xiaoqing Wu (788978)
Yinghui Ling (838919)
Xinyan Cao (6039290)
Feng Kong (459884)
Jing Xin (183453)
Xin Jiang (6348)
Qiaoqin Wu (5846117)
Wenying Wang (187565)
Qingmei Li (301661)
Shengnan Zhang (1340988)
Fengrui Wu (5639615)
Di Zhang (197959)
Rong Wang (59795)
Xiaorong Zhang (510884)
Wenyong Li (715719)

December 2018

Figure S1. The comparison of features of genomic characteristics between lncRNA/TUCP and mRNA. A. Th...

Additional file 2: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Sequences of Cattle LncRNAs. A fasta file containing all the lncRNA sequences from cattle. (FA 14461...

Table_5_Characterization of lncRNA–miRNA–mRNA Network to Reveal Potential Functional ceRNAs in Bovine Skeletal Muscle.XLSX

Binglin Yue (6382244)
Hui Li (32376)
Mei Liu (41760)
Jiyao Wu (6382247)
Mingxun Li (513458)
Chuzhao Lei (513461)
Bizhi Huang (6382250)
Hong Chen (108084)

February 2019

There is growing evidence that non-coding RNAs are emerging as critical regulators of skeletal muscl...

Additional file 13: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Expression of Pig LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries per ti...

Additional file 4: Table S3. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

List of differentially expressed lncRNAs from four skeletal muscle developmental stages. (XLSX 122 k...

Additional file 3: Figure S1. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

Chromosome distribution of lncRNAs identified in goat skeletal muscle. (TIF 120 kb

Additional file 6: Table S4. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

Protein-coding genes detected 10-kb upstream and downstream of the differentially expressed lncRNAs....

Additional file 9: Table S7. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Siyuan Zhan (3308118)
Yao Dong (3308124)
Wei Zhao (14321)
Jiazhong Guo (3308121)
Tao Zhong (501589)
Linjie Wang (152532)
Li Li (14993)
Hongping Zhang (152549)

August 2016

Functional enrichment analysis of protein-coding genes co-expressed with lncRNAs. (XLSX 160 kb

Identification and Characterization of lncRNAs Expression Profile Related to Goat Skeletal Muscle at Different Development Stages

Haiyin Han
Xianwei Wang
Wentao Li
Jiannan Liu
Yekai Fan
Hui Zhang
Junqi Yang
Yahui Gao
Yufang Liu

October 2022

LncRNAs are essential for regulating skeletal muscle. However, the expression profile and function o...

Additional file 5: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

Functional enrichment analysis of the protein-coding genes of lncRNAs in cis. (XLS 360Â kb

Additional file 20: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Conserved LncRNAs. The 39 groups of orthologous genes across all five species are listed with the as...

Additional file 7: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

Functional enrichment analysis of protein-coding genes of lncRNAs in trans. (XLS 7903Â kb

Additional file 4: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

The protein-coding genes within 10 k and 100Â k upstream and downstream of an lncRNA. (XLSX 55Â kb

Additional file 5: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Exon Locations of Cattle LncRNAs. The genomic locations of the exons of all cattle lncRNAs. (GTF 435...

Additional file 2: of Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)

Hangxing Ren (389142)
Gaofu Wang (3538913)
Lei Chen (54296)
Jing Jiang (130103)
Liangjia Liu (3538910)
Nianfu Li (3538916)
Jinhong Zhao (3090435)
Xiaoyan Sun (28501)
Peng Zhou (116747)

January 2016

Comparison of TE components between individual subtypes of lncRNAs and mRNAs. (XLSX 17Â kb

Additional file 1: of Filtered reproductive long non-coding RNAs by genome-wide analyses of goat ovary at different estrus periods

Yong Liu (6908)
Bing Qi (492962)
Juan Xie (461923)
Xiaoqing Wu (788978)
Yinghui Ling (838919)
Xinyan Cao (6039290)
Feng Kong (459884)
Jing Xin (183453)
Xin Jiang (6348)
Qiaoqin Wu (5846117)
Wenying Wang (187565)
Qingmei Li (301661)
Shengnan Zhang (1340988)
Fengrui Wu (5639615)
Di Zhang (197959)
Rong Wang (59795)
Xiaorong Zhang (510884)
Wenyong Li (715719)

December 2018

Figure S1. The comparison of features of genomic characteristics between lncRNA/TUCP and mRNA. A. Th...

Additional file 2: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Sequences of Cattle LncRNAs. A fasta file containing all the lncRNA sequences from cattle. (FA 14461...

Table_5_Characterization of lncRNA–miRNA–mRNA Network to Reveal Potential Functional ceRNAs in Bovine Skeletal Muscle.XLSX

Binglin Yue (6382244)
Hui Li (32376)
Mei Liu (41760)
Jiyao Wu (6382247)
Mingxun Li (513458)
Chuzhao Lei (513461)
Bizhi Huang (6382250)
Hong Chen (108084)

February 2019

There is growing evidence that non-coding RNAs are emerging as critical regulators of skeletal muscl...

Additional file 13: of Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Colin Kern (5766899)
Ying Wang (11406)
James Chitwood (243864)
Ian Korf (3780)
Mary Delany (5766902)
Hans Cheng (3418421)
Juan Medrano (3562292)
Alison Van Eenennaam (5766905)
Catherine Ernst (5766908)
Pablo Ross (5492783)
Huaijun Zhou (244952)

September 2018

Expression of Pig LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries per ti...

Additional file 5: Figure S2. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Abstract

Extracted data

Additional file 5: Figure S2. of Genome-wide identification and characterization of long non-coding RNAs in developmental skeletal muscle of fetal goat

Abstract

Extracted data

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