<p>Dataset A consists of 67,748 DNA sequences with average length of 41 Kb and dataset B is the human genome with 24 chromosomes, one mitochondrial sequence and 169 scaffolds. All tests were repeated three times, and the average time or memory usage was computed. See supplementary data for details of test data and commands.</p
Comparison of FASTA sequences between Sanger Sequencing and Next-Generation Sequencing.</p
This document describes a parallel genomic sequence comparison operator for reconfigurable platforms...
<p>Note: The minimum match length in the first pass is set to 25 in this experiment. The unit of ti...
<p>Dataset A consists of 67,748 DNA sequences with average length of 41 Kb; dataset B is the human g...
<p>The memory usage for all tools is based on a single overlap threshold or <i>k-mer</i> and is eval...
<p>Memory usage is depicted as a function of genome size when setting the sample size to 50, and is ...
<p>The result dataset contain DNA sequence information corresponding to the test data. (A) The conve...
<p>Computational time is depicted as a function of genome size when setting the sample size to 50, a...
On the forefront of recent HPC innovations are Field Programmable Gate Arrays (FPGA), which promise ...
<p>The first, second, and third columns show the size of the database chunk, the computation time, a...
<p>Runtime comparisons between fetchGWI using plain and compressed index files, tagger, and megablas...
<p>(A) Comparison of recall (blue line) and precision (red line) for cDNA microarray data set versus...
Individual and concatenated fasta files for 3448 Autosomal and 140 Z linked markers identified using...
<p>The memory usage for all tools is based on a single overlap threshold or <i>k-mer</i> and is eval...
<p>The figure shows the memory usage of the tested algorithms when processing databases with an aver...
Comparison of FASTA sequences between Sanger Sequencing and Next-Generation Sequencing.</p
This document describes a parallel genomic sequence comparison operator for reconfigurable platforms...
<p>Note: The minimum match length in the first pass is set to 25 in this experiment. The unit of ti...
<p>Dataset A consists of 67,748 DNA sequences with average length of 41 Kb; dataset B is the human g...
<p>The memory usage for all tools is based on a single overlap threshold or <i>k-mer</i> and is eval...
<p>Memory usage is depicted as a function of genome size when setting the sample size to 50, and is ...
<p>The result dataset contain DNA sequence information corresponding to the test data. (A) The conve...
<p>Computational time is depicted as a function of genome size when setting the sample size to 50, a...
On the forefront of recent HPC innovations are Field Programmable Gate Arrays (FPGA), which promise ...
<p>The first, second, and third columns show the size of the database chunk, the computation time, a...
<p>Runtime comparisons between fetchGWI using plain and compressed index files, tagger, and megablas...
<p>(A) Comparison of recall (blue line) and precision (red line) for cDNA microarray data set versus...
Individual and concatenated fasta files for 3448 Autosomal and 140 Z linked markers identified using...
<p>The memory usage for all tools is based on a single overlap threshold or <i>k-mer</i> and is eval...
<p>The figure shows the memory usage of the tested algorithms when processing databases with an aver...
Comparison of FASTA sequences between Sanger Sequencing and Next-Generation Sequencing.</p
This document describes a parallel genomic sequence comparison operator for reconfigurable platforms...
<p>Note: The minimum match length in the first pass is set to 25 in this experiment. The unit of ti...
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