<p>Dataset A consists of 67,748 DNA sequences with average length of 41 Kb; dataset B is the human genome with 24 chromosomes, one mitochondrial sequence and 169 scaffolds and dataset C contains 9,186,045 Illumina SE reads. All tests were repeated five times, and the average time or memory usage was computed. See supplementary data for details of test data and commands.</p
The collection consists of RNA sequencing (RNA-seq) datasets in fastq format which were used to eval...
<p>Comparison of 250 bp read performance on databases composed of genera that have at least 10 examp...
<p>(a) The genomic paired DNA library with 19 812 604 Illumina reads was matched using MAQ (chromoso...
<p>Dataset A consists of 67,748 DNA sequences with average length of 41 Kb and dataset B is the huma...
<p>The result dataset contain DNA sequence information corresponding to the test data. (A) The conve...
<p>Note: Values in each column (except for ) refer to bit per base (bpb). refers to the respective ...
<p>(A) A density plot of the expected distribution of fragment lengths, with peaks at 124 and 142 bp...
This document provides the implementation details of LW-FQZip 2 and the detailed experimental result...
On the forefront of recent HPC innovations are Field Programmable Gate Arrays (FPGA), which promise ...
The panels represent results obtained for DNA sequences having a particular composition: 25% (A), 35...
<p>While the database with the highly similar genera has about the same performance as the original,...
The storage, manipulation, and transfer of the large amounts of data produced by high-throughput seq...
<p>The first, second, and third columns show the size of the database chunk, the computation time, a...
Comprehensive performance assessment is important for improving sequence database search methods. Se...
The exponential growth of genomic data has recently motivated the development of compression algorit...
The collection consists of RNA sequencing (RNA-seq) datasets in fastq format which were used to eval...
<p>Comparison of 250 bp read performance on databases composed of genera that have at least 10 examp...
<p>(a) The genomic paired DNA library with 19 812 604 Illumina reads was matched using MAQ (chromoso...
<p>Dataset A consists of 67,748 DNA sequences with average length of 41 Kb and dataset B is the huma...
<p>The result dataset contain DNA sequence information corresponding to the test data. (A) The conve...
<p>Note: Values in each column (except for ) refer to bit per base (bpb). refers to the respective ...
<p>(A) A density plot of the expected distribution of fragment lengths, with peaks at 124 and 142 bp...
This document provides the implementation details of LW-FQZip 2 and the detailed experimental result...
On the forefront of recent HPC innovations are Field Programmable Gate Arrays (FPGA), which promise ...
The panels represent results obtained for DNA sequences having a particular composition: 25% (A), 35...
<p>While the database with the highly similar genera has about the same performance as the original,...
The storage, manipulation, and transfer of the large amounts of data produced by high-throughput seq...
<p>The first, second, and third columns show the size of the database chunk, the computation time, a...
Comprehensive performance assessment is important for improving sequence database search methods. Se...
The exponential growth of genomic data has recently motivated the development of compression algorit...
The collection consists of RNA sequencing (RNA-seq) datasets in fastq format which were used to eval...
<p>Comparison of 250 bp read performance on databases composed of genera that have at least 10 examp...
<p>(a) The genomic paired DNA library with 19 812 604 Illumina reads was matched using MAQ (chromoso...