List of representative species used to calculate the evolutionary trees of the entire Cdc48 family. (DOCX 44 kb
Additional file 8: Table S3. Number of local COGs, broken down by ancestrality, paralogy and variabi...
Figure S6. Distribution of 573 S-gene families across eukaryotic species. The heatmap represents the...
Additional file 3: Fig. S2. Fractions of conserved, medium and variable positions in each csCOG by l...
A detailed view of the linker region between the D1- and D2-domain. WebLogo representation [119] of ...
Evolutionary tree of the canonical N-domains of different Cdc48 family members. Our analysis reveale...
Repertoire of Cdc48 in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages) and ...
WebLogo representation of the two D-domains of the different Cdc48 family members. Sequence logos we...
Figure S4. Putative phylogeny of eukaryotes, based on He et al. [85], that shows the distribution of...
TABLE (.XLS) including the data and IDs of the 17,437 human protein-coding genes included in each of...
Identification list of all MDM sequences that are in the phylogenetic tree in Fig. 2B. The species i...
Table S4. List of the 30 genomes selected for detailed analysis. Description of data: The table cont...
Additional file 9: Table S4. Genomes accessions and summary of genomic data used in this work
Hox clusters size of those mammals with sequenced genomes included in our study. (DOCX 114 kb
Loci and amino acid sequences of ABC proteins identified in this work. (XLS 1484 kb
List of genomes used for phylogenetic and comparative genomic analysis.) (DOCX 17 kb
Additional file 8: Table S3. Number of local COGs, broken down by ancestrality, paralogy and variabi...
Figure S6. Distribution of 573 S-gene families across eukaryotic species. The heatmap represents the...
Additional file 3: Fig. S2. Fractions of conserved, medium and variable positions in each csCOG by l...
A detailed view of the linker region between the D1- and D2-domain. WebLogo representation [119] of ...
Evolutionary tree of the canonical N-domains of different Cdc48 family members. Our analysis reveale...
Repertoire of Cdc48 in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages) and ...
WebLogo representation of the two D-domains of the different Cdc48 family members. Sequence logos we...
Figure S4. Putative phylogeny of eukaryotes, based on He et al. [85], that shows the distribution of...
TABLE (.XLS) including the data and IDs of the 17,437 human protein-coding genes included in each of...
Identification list of all MDM sequences that are in the phylogenetic tree in Fig. 2B. The species i...
Table S4. List of the 30 genomes selected for detailed analysis. Description of data: The table cont...
Additional file 9: Table S4. Genomes accessions and summary of genomic data used in this work
Hox clusters size of those mammals with sequenced genomes included in our study. (DOCX 114 kb
Loci and amino acid sequences of ABC proteins identified in this work. (XLS 1484 kb
List of genomes used for phylogenetic and comparative genomic analysis.) (DOCX 17 kb
Additional file 8: Table S3. Number of local COGs, broken down by ancestrality, paralogy and variabi...
Figure S6. Distribution of 573 S-gene families across eukaryotic species. The heatmap represents the...
Additional file 3: Fig. S2. Fractions of conserved, medium and variable positions in each csCOG by l...
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