Site-specific selection on Gal4 inferred with the experimentally informed models. This figure is equivalent to Fig. 4 but for Gal4. (PDF 252 kb
<p>−2Δ<i>L</i>, likelihood ratio test to detect positive selection with 1 degree of freedom; Foregro...
Abstract We have investigated whether regions of the genome showing signs of positive selection in s...
<p>For each gene, the total number of codons, as well as those detected to be under negative, neutra...
Site-specific selection on NP inferred with the experimentally informed models. This figure is equiv...
The results of the d N/d S analysis are qualitatively similar when using HyPhy rather than phydms. T...
Simulations validate the statistical approach used to identify diversifying selection. Using the act...
Clarification of subtleties in the relationship between amino-acid preferences and substitution mode...
Specification of hydrophobicity factors in the model, and the matrix of hydrophobicity scores betwee...
Abstract Background Sites of p...
This figure shows the distribution over sites of the Kullback-Leibler divergence of the experimental...
<p>Only genes with known identities were shown. The full list of genes were provided in <a href="htt...
<p>Sites marked in bold are positive selected sites that meet the criteria of all applied methods. U...
The GPP model uses a logarithm link function to link the non-zero off-diagonal elements of the 61â...
The 10-taxon tree used in simulation 1c that was obtained by dividing each terminal taxon of the 5-t...
<p>Likelihood ratio tests (−2Δ<i>l</i>) comparing a null and positive selection models (M1a vs M2a, ...
<p>−2Δ<i>L</i>, likelihood ratio test to detect positive selection with 1 degree of freedom; Foregro...
Abstract We have investigated whether regions of the genome showing signs of positive selection in s...
<p>For each gene, the total number of codons, as well as those detected to be under negative, neutra...
Site-specific selection on NP inferred with the experimentally informed models. This figure is equiv...
The results of the d N/d S analysis are qualitatively similar when using HyPhy rather than phydms. T...
Simulations validate the statistical approach used to identify diversifying selection. Using the act...
Clarification of subtleties in the relationship between amino-acid preferences and substitution mode...
Specification of hydrophobicity factors in the model, and the matrix of hydrophobicity scores betwee...
Abstract Background Sites of p...
This figure shows the distribution over sites of the Kullback-Leibler divergence of the experimental...
<p>Only genes with known identities were shown. The full list of genes were provided in <a href="htt...
<p>Sites marked in bold are positive selected sites that meet the criteria of all applied methods. U...
The GPP model uses a logarithm link function to link the non-zero off-diagonal elements of the 61â...
The 10-taxon tree used in simulation 1c that was obtained by dividing each terminal taxon of the 5-t...
<p>Likelihood ratio tests (−2Δ<i>l</i>) comparing a null and positive selection models (M1a vs M2a, ...
<p>−2Δ<i>L</i>, likelihood ratio test to detect positive selection with 1 degree of freedom; Foregro...
Abstract We have investigated whether regions of the genome showing signs of positive selection in s...
<p>For each gene, the total number of codons, as well as those detected to be under negative, neutra...
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