Additional file 3: Figure S2. of Genome-wide Association Analysis Tracks Bacterial Leaf Blight Resistance Loci In Rice Diverse Germplasm
- Christine Dilla-Ermita (3848641)
- Erwin Tandayu (3848626)
- Venice Juanillas (3848653)
- Jeffrey Detras (3848632)
- Dennis Lozada (3848650)
- Maria Dwiyanti (3848629)
- Casiana Vera Cruz (416308)
- Edwige Mbanjo (3848644)
- Edna Ardales (3848638)
- Maria Diaz (3848635)
- Merlyn Mendioro (3848647)
- Michael Thomson (376401)
- Tobias Kretzschmar (732027)
Publication date
March 2017
DOIAbstract
Genome-wide association analysis of bacterial blight resistance to nine Xoo strains in 248 genotypes based on Efficient Mixed-Model Association eXpedited Model (EMMAX). Manhattan plots for nine Xoo strains (a) PXO61, (b) PXO86, (c) PXO79, (d) PXO71, (e) PXO112, (f) PXO99, (g) PXO339, (h) PXO349, and (i) PXO341. X-axis shows the SNPs along each chromosome; y axis is the − log10 (P-value) for the association. Significant SNPs are those beyond the red line having P-value < 1 × 10 −5. Quantile-quantile plots for nine Xoo strains (j) PXO61, (k) PXO86, (l) PXO79, (m) PXO71, (n) PXO112, (o) PXO99, (p) PXO339, (q) PXO349, and (r) PXO341. (PPTX 720 kb
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