Table of open/closed compartment calls for normal prostate tissue in 100-kb genomic windows. (TXT 1267 kb
Table S1. Primer and probe sequences used for CRISPR verification and methylation-specific qPCR. (XL...
Table S2. Potential deleterious alterations of DNA damage response genes in prostate cancer cell lin...
Table S1. Results of modeling using continuous and binary methylation levels. Table S2. the range of...
Table of log2 fold changes, chi-squared test p values and adjusted p values for all ChIP-seq studies...
Bar chart showing distribution of copy-number calls across PRAD tumour cohort for tumour-specific op...
Boxplots of CpGs in the top diagnostic model from hypermethylated CpGs. Normal data is from benign-a...
Table S1. Primer sequences for β-Actin, miR-34b/c, and miR-193b (panel #1). Table S2. Scorpion prime...
In silico analysis of TCGA data correlating DNA methylation and mRNA expression of commonly methylat...
Co-occurrence of methylation and hydroxymethylation in pathway regulation. This file lists all pathw...
Detailed frequency of DNAm of BRCA1, MGMT, and ERCC1 across cancer entities and corresponding normal...
Figure S1. Box-plots of panel #1 (miR-34b/c, miR-193b) and panel #2 (APC, GSTP1, and RARβ2) promoter...
ROC curve and waterfall plot for diagnostic model applied to an independent cohort of prostate cance...
Table S2. A. Number of CDGs mutated in at least 5 samples with methylation data in one tumor type; B...
Correlations between methylation levels of CpG sites included in the epigenetic signature and mRNA e...
ROC curve and waterfall plot for the top hypermethylated CpG model in the TCGA validation cohort (a-...
Table S1. Primer and probe sequences used for CRISPR verification and methylation-specific qPCR. (XL...
Table S2. Potential deleterious alterations of DNA damage response genes in prostate cancer cell lin...
Table S1. Results of modeling using continuous and binary methylation levels. Table S2. the range of...
Table of log2 fold changes, chi-squared test p values and adjusted p values for all ChIP-seq studies...
Bar chart showing distribution of copy-number calls across PRAD tumour cohort for tumour-specific op...
Boxplots of CpGs in the top diagnostic model from hypermethylated CpGs. Normal data is from benign-a...
Table S1. Primer sequences for β-Actin, miR-34b/c, and miR-193b (panel #1). Table S2. Scorpion prime...
In silico analysis of TCGA data correlating DNA methylation and mRNA expression of commonly methylat...
Co-occurrence of methylation and hydroxymethylation in pathway regulation. This file lists all pathw...
Detailed frequency of DNAm of BRCA1, MGMT, and ERCC1 across cancer entities and corresponding normal...
Figure S1. Box-plots of panel #1 (miR-34b/c, miR-193b) and panel #2 (APC, GSTP1, and RARβ2) promoter...
ROC curve and waterfall plot for diagnostic model applied to an independent cohort of prostate cance...
Table S2. A. Number of CDGs mutated in at least 5 samples with methylation data in one tumor type; B...
Correlations between methylation levels of CpG sites included in the epigenetic signature and mRNA e...
ROC curve and waterfall plot for the top hypermethylated CpG model in the TCGA validation cohort (a-...
Table S1. Primer and probe sequences used for CRISPR verification and methylation-specific qPCR. (XL...
Table S2. Potential deleterious alterations of DNA damage response genes in prostate cancer cell lin...
Table S1. Results of modeling using continuous and binary methylation levels. Table S2. the range of...
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