<p>Transfer functions for each of the three layers of the MAPK cascade (A-C), obtained considering for each layer i) the isolated module (Is, dotted blue), ii) a mechanistic implementation of the model (Seq, dashed-turquoise) and iii) the mathematical composition of isolated response functions (Non-Seq, continous red). The corresponding response coefficient curves are shown in panels (D-F). Turquoise dashed vertical lines show the <i>X</i>10<sub><i>i</i></sub> and <i>X</i>90<sub><i>i</i></sub> values of each layer (i.e. mechanistic scheme), while red solid vertical lines mark the layer’s <i>X</i>10<sub><i>i</i></sub> and <i>X</i>90<sub><i>i</i></sub> associated to the composition of response curves of each module (i.e. <i>F</i><sup><i>non</...
Treatment response assays are often summarized by sigmoidal functions comparing cell survival at a s...
The mitogen activated protein kinase (MAPK) cascade is a three-tiered phosphoryla-tion cascade that ...
<p>Using bead-based multiplex analysis, the total and phosphorylated protein levels of 10 MAPK-relat...
<p>Here the allostery of the substrate inhibits further modifying reactions by disfavouring binding ...
<p>(A) Proposed schematic representation of the bi-modular signalling network, M1 = module 1; M2 = m...
<p>Cartoon representation of the general four layered phosphorelay model. Hydrolysis reactions (on a...
<p>Signal-response curve for topologies 14 (A) and 30 (B). The x-axis corresponds to the signal inpu...
<p>In the absence of the inhibitor there are two stable steady states of the double-phosphorylated s...
<p>Panels <b>A</b>, <b>B</b>, <b>C</b> and <b>D</b> show topologies 14, 16, 30 and 32 respectively, ...
<p>For each topology, we have sampled 1000 parameter sets (rate constants and total protein concentr...
<p><b>A</b> Schematic representation of a five-step kinase cascade (S…extracellular stimulus; and …...
A: State classification indices for Phosphatase1; B: comparison of the output ERK-PP and Phosphatase...
The mitogen activated protein kinase (MAPK) cascade is a three-tiered phosphorylation cascade that i...
<p>Normalized γH2AX dose response curve for AGD (full squares) and CHO (open squares) cells, and cor...
We investigate design principles of linear multi-stage phosphorylation cascades by using quantitativ...
Treatment response assays are often summarized by sigmoidal functions comparing cell survival at a s...
The mitogen activated protein kinase (MAPK) cascade is a three-tiered phosphoryla-tion cascade that ...
<p>Using bead-based multiplex analysis, the total and phosphorylated protein levels of 10 MAPK-relat...
<p>Here the allostery of the substrate inhibits further modifying reactions by disfavouring binding ...
<p>(A) Proposed schematic representation of the bi-modular signalling network, M1 = module 1; M2 = m...
<p>Cartoon representation of the general four layered phosphorelay model. Hydrolysis reactions (on a...
<p>Signal-response curve for topologies 14 (A) and 30 (B). The x-axis corresponds to the signal inpu...
<p>In the absence of the inhibitor there are two stable steady states of the double-phosphorylated s...
<p>Panels <b>A</b>, <b>B</b>, <b>C</b> and <b>D</b> show topologies 14, 16, 30 and 32 respectively, ...
<p>For each topology, we have sampled 1000 parameter sets (rate constants and total protein concentr...
<p><b>A</b> Schematic representation of a five-step kinase cascade (S…extracellular stimulus; and …...
A: State classification indices for Phosphatase1; B: comparison of the output ERK-PP and Phosphatase...
The mitogen activated protein kinase (MAPK) cascade is a three-tiered phosphorylation cascade that i...
<p>Normalized γH2AX dose response curve for AGD (full squares) and CHO (open squares) cells, and cor...
We investigate design principles of linear multi-stage phosphorylation cascades by using quantitativ...
Treatment response assays are often summarized by sigmoidal functions comparing cell survival at a s...
The mitogen activated protein kinase (MAPK) cascade is a three-tiered phosphoryla-tion cascade that ...
<p>Using bead-based multiplex analysis, the total and phosphorylated protein levels of 10 MAPK-relat...