Gene modules inferred from WGCNA analysis of microarray time-course. Expression fold changes and associated false discovery rates (adjusted p values) are from RNA-seq data at the 4-h timepoint. (GZ 278 kb
The best-associated SNP is listed for each cis-eQTL (FDR <Â 0.1). Studies that have previously ident...
Differentially expressed genes for CD8+ T cells of PM and DM patients. Tables S8 and S9 provide diff...
Microsatellite instability (MSI) predictor signature plotted against Tumor Inflammation Signature (T...
Results of differential expression analysis on RNA-seq data. Features are defined in the GTF file in...
Figure S1. Comparison of longer and shorter CD4+ T cell activation timecourses. Figure S2. Summary d...
Autoimmune disease COGS gene prioritisation. Overall COGS gene scores (COGS_Overall_Gene_Score) for ...
Table listing the number of sequences observed in the study (including total, unique, productive, an...
Table S1. Case/control datasets included in the study. Table S2. Loci reaching genome-wide level of ...
Contains the cis-eQTLs with P valueâ<â5Â % for CD4+ T-cells obtained from NRHV participants. (TX...
Differentially expressed genes for CD4+ T cells of PM and DM patients. Table S6 and S7 provide diffe...
Expression of tumor mismatch repair genes versus tumor mutation burden across histological subtypes ...
Table S3. Results of the subset-based meta-analysis for the lead variants showing evidence of opposi...
Contains the normalised expression values for CD4+ T-cells obtained from NRHV participants. (TXT 26 ...
Gene set enrichment results. For all KEGG, Reactome, and Biocarta gene sets, the proportion of genes...
Figure S4. Spleen TCRβ chain gene usage. a Individual TCRβ chain gene families usage in NSG-cmah−/− ...
The best-associated SNP is listed for each cis-eQTL (FDR <Â 0.1). Studies that have previously ident...
Differentially expressed genes for CD8+ T cells of PM and DM patients. Tables S8 and S9 provide diff...
Microsatellite instability (MSI) predictor signature plotted against Tumor Inflammation Signature (T...
Results of differential expression analysis on RNA-seq data. Features are defined in the GTF file in...
Figure S1. Comparison of longer and shorter CD4+ T cell activation timecourses. Figure S2. Summary d...
Autoimmune disease COGS gene prioritisation. Overall COGS gene scores (COGS_Overall_Gene_Score) for ...
Table listing the number of sequences observed in the study (including total, unique, productive, an...
Table S1. Case/control datasets included in the study. Table S2. Loci reaching genome-wide level of ...
Contains the cis-eQTLs with P valueâ<â5Â % for CD4+ T-cells obtained from NRHV participants. (TX...
Differentially expressed genes for CD4+ T cells of PM and DM patients. Table S6 and S7 provide diffe...
Expression of tumor mismatch repair genes versus tumor mutation burden across histological subtypes ...
Table S3. Results of the subset-based meta-analysis for the lead variants showing evidence of opposi...
Contains the normalised expression values for CD4+ T-cells obtained from NRHV participants. (TXT 26 ...
Gene set enrichment results. For all KEGG, Reactome, and Biocarta gene sets, the proportion of genes...
Figure S4. Spleen TCRβ chain gene usage. a Individual TCRβ chain gene families usage in NSG-cmah−/− ...
The best-associated SNP is listed for each cis-eQTL (FDR <Â 0.1). Studies that have previously ident...
Differentially expressed genes for CD8+ T cells of PM and DM patients. Tables S8 and S9 provide diff...
Microsatellite instability (MSI) predictor signature plotted against Tumor Inflammation Signature (T...