OrthoMCL orthogroups containing novel high and low GC gene predictions. OrthoMCL output listing the number of genes, taxa and gene names for each orthogroup that contains at least one novel high or low GC prediction. Novel genes are indicated by bold text. (TXT 55Â kb
Figure S3. GO annotation of 205 interacting partners of 7 selected genes into cellular compartments....
Figure S1. GO annotation of 205 interacting partners of 7 selected genes into biological processes. ...
The results from differential expression analyses for NAC and bZIP genes using DESeq2, EdgeR (glm mo...
RNA-sequencing data used to assess tissue and treatment specificity of the novel high and low GC gen...
Distribution of GC content, MAKER six HMMs gene predictions and novel genes predicted by the high an...
List of MSU-RGAP genes that are not in the MAKER six HMMs annotation, functional descriptions and th...
Venn diagram depicting the overlap between the rice GC-specific sixHMM annotation and IGRSP v7 annot...
AED curves from various MAKER annotation methods. Figure S1. AED curves of MAKER annotations of Oryz...
Background: Accurate structural annotation depends on well-trained gene prediction programs. Trainin...
Abstract Background Accurate structural annotation depends on well-trained gene prediction programs....
Detail Gene ontology (GO) enrichment analysis of CNV genes. Genes were annotated by InterProScan to ...
Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...
Figure S2. GO annotation of 205 interacting partners of 7 selected genes into molecular functions. (...
Significantly enriched Gene Ontology terms for sequences that were unassigned during orthogroup clas...
Comparison between orthology relationships predicted by EnsemblPlants / Gramene platforms and by our...
Figure S3. GO annotation of 205 interacting partners of 7 selected genes into cellular compartments....
Figure S1. GO annotation of 205 interacting partners of 7 selected genes into biological processes. ...
The results from differential expression analyses for NAC and bZIP genes using DESeq2, EdgeR (glm mo...
RNA-sequencing data used to assess tissue and treatment specificity of the novel high and low GC gen...
Distribution of GC content, MAKER six HMMs gene predictions and novel genes predicted by the high an...
List of MSU-RGAP genes that are not in the MAKER six HMMs annotation, functional descriptions and th...
Venn diagram depicting the overlap between the rice GC-specific sixHMM annotation and IGRSP v7 annot...
AED curves from various MAKER annotation methods. Figure S1. AED curves of MAKER annotations of Oryz...
Background: Accurate structural annotation depends on well-trained gene prediction programs. Trainin...
Abstract Background Accurate structural annotation depends on well-trained gene prediction programs....
Detail Gene ontology (GO) enrichment analysis of CNV genes. Genes were annotated by InterProScan to ...
Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...
Figure S2. GO annotation of 205 interacting partners of 7 selected genes into molecular functions. (...
Significantly enriched Gene Ontology terms for sequences that were unassigned during orthogroup clas...
Comparison between orthology relationships predicted by EnsemblPlants / Gramene platforms and by our...
Figure S3. GO annotation of 205 interacting partners of 7 selected genes into cellular compartments....
Figure S1. GO annotation of 205 interacting partners of 7 selected genes into biological processes. ...
The results from differential expression analyses for NAC and bZIP genes using DESeq2, EdgeR (glm mo...