Additional file 2: Table S1. of Association between long interspersed nuclear element-1 methylation levels and relapse in Wilms tumors

Bruna de Sá Pereira (4681474)
Rafaela Montalvão-de-Azevedo (4681477)
Paulo Faria (4681486)
Neimar de Paula Silva (3234528)
Pedro Nicolau-Neto (4681480)
Mariana Maschietto (561649)
Beatriz de Camargo (2518867)
Sheila Soares Lima (4681483)

Open link

Publication date

December 2017

DOI

10.6084/m9.figshare.5696503.v1

Abstract

Updated clinical data and methylation mean of the 5 LINE-1 sites of each patient. (DOCX 33 kb

Extracted data

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Data Protection

Additional file 2: Table S1. of Association between long interspersed nuclear element-1 methylation levels and relapse in Wilms tumors

Bruna de Sá Pereira (4681474)
Rafaela Montalvão-de-Azevedo (4681477)
Paulo Faria (4681486)
Neimar de Paula Silva (3234528)
Pedro Nicolau-Neto (4681480)
Mariana Maschietto (561649)
Beatriz de Camargo (2518867)
Sheila Soares Lima (4681483)

Open link

Publication date

December 2017

DOI

10.6084/m9.figshare.5696503.v1

Abstract

Updated clinical data and methylation mean of the 5 LINE-1 sites of each patient. (DOCX 33 kb

Extracted data

Xian-Yue Ren (714116)
Xin Wen (470639)
Ying-Qing Li (5750234)
Jian Zhang (1682)
Qing-Mei He (545472)
Xiao-Jing Yang (580274)
Xin-Ran Tang (714117)
Ya-Qin Wang (4522846)
Pan-Pan Zhang (3278736)
Xiao-Zhong Chen (5750237)
Bin Cheng (64483)
Jun Ma (9393)
Na Liu (102929)

September 2018

Table S1. The methylation probes of TIPE3 in Infinium Human Methylation 450Â K BeadChip (Illumina). ...

Additional file 1: Table S1. of Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer

Tyler McInnes (3874525)
Donghui Zou (3874513)
Dasari Rao (3874516)
Francesca Munro (3874534)
Vicky Phillips (3874528)
John McCall (3874522)
Michael Black (246211)
Anthony Reeve (3874519)
Parry Guilford (3874531)

March 2017

258 genes hypermethylated in more than 90% of all CIMP-H tumours. Two-hundred fifty eight CpG island...

Additional file 1: Table S1. of Assessment of DNA methylation profiling and copy number variation as indications of clonal relationship in ipsilateral and contralateral breast cancers to distinguish recurrent breast cancer from a second primary tumour

Katie Huang (3420263)
Thomas Mikeska (274849)
Jason Li (23213)
Elena Takano (3420257)
Ewan Millar (3420266)
Peter Graham (831821)
Samantha Boyle (562679)
Ian Campbell (205212)
Terence Speed (3420260)
Alexander Dobrovic (8304)
Stephen Fox (152886)

October 2015

Comparison of DNA methylation frequency of genes screened in breast carcinomas with the methylation ...

Additional file 4: Table S2. of Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer

Mami Kaneko (3453911)
Masanori Kotake (3453902)
Hiroyuki Bando (3453908)
Tetsuji Yamada (3453914)
Hirofumi Takemura (3453905)
Toshinari Minamoto (280844)

December 2016

Comparison of the levels of tumor LINE-1 methylation with the clinical and histopathological charact...

Additional file 1: of Decreased methylation in the SNAI2 and ADAM23 genes associated with de-differentiation and haematogenous dissemination in breast cancers

Lenka Kalinkova (5725769)
Iveta Zmetakova (5725772)
Bozena Smolkova (5725775)
Gabriel Minarik (2512540)
Tatiana Sedlackova (5725778)
Viera Horvathova Kajabova (5725781)
Zuzana Cierna (5725784)
Michal Mego (774807)
Ivana Fridrichova (5725787)

September 2018

DNA methylation levels in various types of samples from BC patients with different histological grad...

Association between long interspersed nuclear element-1 methylation levels and relapse in Wilms tumors

Bruna M. de Sá Pereira
Rafaela Montalvão-de-Azevedo
Paulo Antônio Faria
Neimar de Paula Silva
Pedro Nicolau-Neto
Mariana Maschietto
Beatriz de Camargo
Sheila Coelho Soares Lima

December 2017

Abstract Background Wilms tumor (WT) is a curable pediatric renal malignancy, but there is a need fo...

Additional file 2: Table S1. of Repetitive element hypermethylation in multiple sclerosis patients

K. Neven (3527183)
M. Piola (3527195)
L. Angelici (3527204)
F. Cortini (3527180)
C. Fenoglio (3527198)
D. Galimberti (3527201)
A. Pesatori (3527186)
E. Scarpini (3527189)
V. Bollati (3527192)

June 2016

Characteristics of Multiple Sclerosis (MS) patients and healthy controls for each methylation marker...

Additional file 5: Figure S2. of DNA hypermethylation and decreased mRNA expression of MAL, PRIMA1, PTGDR and SFRP1 in colorectal adenoma and cancer

Alexandra Kalmár (123738)
Bálint Péterfia (130981)
Péter Hollósi (155769)
Orsolya Galamb (123720)
Sándor Spisák (123726)
Barnabás Wichmann (123721)
András Bodor (439486)
Kinga Tóth (123732)
Árpád Patai (785267)
Gábor Valcz (466332)
Zsófia Nagy (3515417)
Vivien Kubák (3515414)
Zsolt Tulassay (123741)
Ilona Kovalszky (130989)
Béla Molnár (123745)

October 2015

Box plot representation of DNA methylation alterations of analysed genes in biopsies and macrodissec...

Additional file 1: of The associations of DNA methylation alterations in oxidative stress-related genes with cancer incidence and mortality outcomes: a population-based cohort study

Xīn Gào (6262232)
Yan Zhang (8098)
Barbara Burwinkel (146479)
Yang Xuan (419293)
Bernd Holleczek (287845)
Hermann Brenner (63649)
Ben Schöttker (300688)

January 2019

Table S1. 519 genes coding for proteins involved in pathways from oxidative stress to cancer. Table ...

Additional file 1: of Gene promoter and exon DNA methylation changes in colon cancer development – mRNA expression and tumor mutation alterations

Béla Molnár (123745)
Orsolya Galamb (123720)
Bálint Péterfia (130981)
Barnabás Wichmann (123721)
István Csabai (130985)
András Bodor (439486)
Alexandra Kalmár (123738)
Krisztina Szigeti (5454470)
Barbara Barták (764299)
Zsófia Nagy (3515417)
Gábor Valcz (466332)
Árpád Patai (785267)
Péter Igaz (628519)
Zsolt Tulassay (123741)

June 2018

Table S1A. Top50 hypermethylated DMRs in CRC versus NAT comparison. Table S1B. Top50 hypomethylated ...

Additional file 4: of Integrated analyses of multi-omics reveal global patterns of methylation and hydroxymethylation and screen the tumor suppressive roles of HADHB in colorectal cancer

Yimin Zhu (101874)
Hanlin Lu (2925378)
Dandan Zhang (228849)
Meiyan Li (441468)
Xiaohui Sun (520181)
Ledong Wan (1947580)
Dan Yu (214174)
Yiping Tian (4908259)
Hongchuan Jin (194460)
Aifen Lin (3504350)
Fei Gao (29262)
Maode Lai (15338)

March 2018

Figure S3. Methylation and hydroxymethylation levels distribution in different types of genomic elem...

Additional file 6: Figure S3. of Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer

Mami Kaneko (3453911)
Masanori Kotake (3453902)
Hiroyuki Bando (3453908)
Tetsuji Yamada (3453914)
Hirofumi Takemura (3453905)
Toshinari Minamoto (280844)

December 2016

Influence of clinical and histopathological parameters and of tumor LINE-1 methylation levels on the...

Additional file 2: of Gene promoter and exon DNA methylation changes in colon cancer development – mRNA expression and tumor mutation alterations

Béla Molnár (123745)
Orsolya Galamb (123720)
Bálint Péterfia (130981)
Barnabás Wichmann (123721)
István Csabai (130985)
András Bodor (439486)
Alexandra Kalmár (123738)
Krisztina Szigeti (5454470)
Barbara Barták (764299)
Zsófia Nagy (3515417)
Gábor Valcz (466332)
Árpád Patai (785267)
Péter Igaz (628519)
Zsolt Tulassay (123741)

June 2018

Figure S1. Box plots of significant DMRs in TP53 pathway gene promoters between CRC and NAT samples....

Additional file 5: Table S3. of Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer

Mami Kaneko (3453911)
Masanori Kotake (3453902)
Hiroyuki Bando (3453908)
Tetsuji Yamada (3453914)
Hirofumi Takemura (3453905)
Toshinari Minamoto (280844)

December 2016

Multivariate analysis for the prognostic significance of clinicopathologic factors and tumor LINE-1 ...

Additional file 1: of TIPE3 hypermethylation correlates with worse prognosis and promotes tumor progression in nasopharyngeal carcinoma

Xian-Yue Ren (714116)
Xin Wen (470639)
Ying-Qing Li (5750234)
Jian Zhang (1682)
Qing-Mei He (545472)
Xiao-Jing Yang (580274)
Xin-Ran Tang (714117)
Ya-Qin Wang (4522846)
Pan-Pan Zhang (3278736)
Xiao-Zhong Chen (5750237)
Bin Cheng (64483)
Jun Ma (9393)
Na Liu (102929)

September 2018

Table S1. The methylation probes of TIPE3 in Infinium Human Methylation 450Â K BeadChip (Illumina). ...

Additional file 1: Table S1. of Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer

Tyler McInnes (3874525)
Donghui Zou (3874513)
Dasari Rao (3874516)
Francesca Munro (3874534)
Vicky Phillips (3874528)
John McCall (3874522)
Michael Black (246211)
Anthony Reeve (3874519)
Parry Guilford (3874531)

March 2017

258 genes hypermethylated in more than 90% of all CIMP-H tumours. Two-hundred fifty eight CpG island...

Katie Huang (3420263)
Thomas Mikeska (274849)
Jason Li (23213)
Elena Takano (3420257)
Ewan Millar (3420266)
Peter Graham (831821)
Samantha Boyle (562679)
Ian Campbell (205212)
Terence Speed (3420260)
Alexander Dobrovic (8304)
Stephen Fox (152886)

October 2015

Comparison of DNA methylation frequency of genes screened in breast carcinomas with the methylation ...

Additional file 4: Table S2. of Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer

Mami Kaneko (3453911)
Masanori Kotake (3453902)
Hiroyuki Bando (3453908)
Tetsuji Yamada (3453914)
Hirofumi Takemura (3453905)
Toshinari Minamoto (280844)

December 2016

Comparison of the levels of tumor LINE-1 methylation with the clinical and histopathological charact...

Additional file 1: of Decreased methylation in the SNAI2 and ADAM23 genes associated with de-differentiation and haematogenous dissemination in breast cancers

Lenka Kalinkova (5725769)
Iveta Zmetakova (5725772)
Bozena Smolkova (5725775)
Gabriel Minarik (2512540)
Tatiana Sedlackova (5725778)
Viera Horvathova Kajabova (5725781)
Zuzana Cierna (5725784)
Michal Mego (774807)
Ivana Fridrichova (5725787)

September 2018

DNA methylation levels in various types of samples from BC patients with different histological grad...

Association between long interspersed nuclear element-1 methylation levels and relapse in Wilms tumors

Bruna M. de Sá Pereira
Rafaela Montalvão-de-Azevedo
Paulo Antônio Faria
Neimar de Paula Silva
Pedro Nicolau-Neto
Mariana Maschietto
Beatriz de Camargo
Sheila Coelho Soares Lima

December 2017

Abstract Background Wilms tumor (WT) is a curable pediatric renal malignancy, but there is a need fo...

Additional file 2: Table S1. of Repetitive element hypermethylation in multiple sclerosis patients

K. Neven (3527183)
M. Piola (3527195)
L. Angelici (3527204)
F. Cortini (3527180)
C. Fenoglio (3527198)
D. Galimberti (3527201)
A. Pesatori (3527186)
E. Scarpini (3527189)
V. Bollati (3527192)

June 2016

Characteristics of Multiple Sclerosis (MS) patients and healthy controls for each methylation marker...

Additional file 5: Figure S2. of DNA hypermethylation and decreased mRNA expression of MAL, PRIMA1, PTGDR and SFRP1 in colorectal adenoma and cancer

Alexandra Kalmár (123738)
Bálint Péterfia (130981)
Péter Hollósi (155769)
Orsolya Galamb (123720)
Sándor Spisák (123726)
Barnabás Wichmann (123721)
András Bodor (439486)
Kinga Tóth (123732)
Árpád Patai (785267)
Gábor Valcz (466332)
Zsófia Nagy (3515417)
Vivien Kubák (3515414)
Zsolt Tulassay (123741)
Ilona Kovalszky (130989)
Béla Molnár (123745)

October 2015

Box plot representation of DNA methylation alterations of analysed genes in biopsies and macrodissec...

Additional file 1: of The associations of DNA methylation alterations in oxidative stress-related genes with cancer incidence and mortality outcomes: a population-based cohort study

Xīn Gào (6262232)
Yan Zhang (8098)
Barbara Burwinkel (146479)
Yang Xuan (419293)
Bernd Holleczek (287845)
Hermann Brenner (63649)
Ben Schöttker (300688)

January 2019

Table S1. 519 genes coding for proteins involved in pathways from oxidative stress to cancer. Table ...

Additional file 1: of Gene promoter and exon DNA methylation changes in colon cancer development – mRNA expression and tumor mutation alterations

Béla Molnár (123745)
Orsolya Galamb (123720)
Bálint Péterfia (130981)
Barnabás Wichmann (123721)
István Csabai (130985)
András Bodor (439486)
Alexandra Kalmár (123738)
Krisztina Szigeti (5454470)
Barbara Barták (764299)
Zsófia Nagy (3515417)
Gábor Valcz (466332)
Árpád Patai (785267)
Péter Igaz (628519)
Zsolt Tulassay (123741)

June 2018

Table S1A. Top50 hypermethylated DMRs in CRC versus NAT comparison. Table S1B. Top50 hypomethylated ...

Additional file 4: of Integrated analyses of multi-omics reveal global patterns of methylation and hydroxymethylation and screen the tumor suppressive roles of HADHB in colorectal cancer

Yimin Zhu (101874)
Hanlin Lu (2925378)
Dandan Zhang (228849)
Meiyan Li (441468)
Xiaohui Sun (520181)
Ledong Wan (1947580)
Dan Yu (214174)
Yiping Tian (4908259)
Hongchuan Jin (194460)
Aifen Lin (3504350)
Fei Gao (29262)
Maode Lai (15338)

March 2018

Figure S3. Methylation and hydroxymethylation levels distribution in different types of genomic elem...

Additional file 6: Figure S3. of Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer

Mami Kaneko (3453911)
Masanori Kotake (3453902)
Hiroyuki Bando (3453908)
Tetsuji Yamada (3453914)
Hirofumi Takemura (3453905)
Toshinari Minamoto (280844)

December 2016

Influence of clinical and histopathological parameters and of tumor LINE-1 methylation levels on the...

Additional file 2: of Gene promoter and exon DNA methylation changes in colon cancer development – mRNA expression and tumor mutation alterations

Béla Molnár (123745)
Orsolya Galamb (123720)
Bálint Péterfia (130981)
Barnabás Wichmann (123721)
István Csabai (130985)
András Bodor (439486)
Alexandra Kalmár (123738)
Krisztina Szigeti (5454470)
Barbara Barták (764299)
Zsófia Nagy (3515417)
Gábor Valcz (466332)
Árpád Patai (785267)
Péter Igaz (628519)
Zsolt Tulassay (123741)

June 2018

Figure S1. Box plots of significant DMRs in TP53 pathway gene promoters between CRC and NAT samples....

Additional file 5: Table S3. of Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer

Mami Kaneko (3453911)
Masanori Kotake (3453902)
Hiroyuki Bando (3453908)
Tetsuji Yamada (3453914)
Hirofumi Takemura (3453905)
Toshinari Minamoto (280844)

December 2016

Multivariate analysis for the prognostic significance of clinicopathologic factors and tumor LINE-1 ...

Additional file 1: of TIPE3 hypermethylation correlates with worse prognosis and promotes tumor progression in nasopharyngeal carcinoma

Xian-Yue Ren (714116)
Xin Wen (470639)
Ying-Qing Li (5750234)
Jian Zhang (1682)
Qing-Mei He (545472)
Xiao-Jing Yang (580274)
Xin-Ran Tang (714117)
Ya-Qin Wang (4522846)
Pan-Pan Zhang (3278736)
Xiao-Zhong Chen (5750237)
Bin Cheng (64483)
Jun Ma (9393)
Na Liu (102929)

September 2018

Table S1. The methylation probes of TIPE3 in Infinium Human Methylation 450Â K BeadChip (Illumina). ...

Additional file 1: Table S1. of Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer

Tyler McInnes (3874525)
Donghui Zou (3874513)
Dasari Rao (3874516)
Francesca Munro (3874534)
Vicky Phillips (3874528)
John McCall (3874522)
Michael Black (246211)
Anthony Reeve (3874519)
Parry Guilford (3874531)

March 2017

258 genes hypermethylated in more than 90% of all CIMP-H tumours. Two-hundred fifty eight CpG island...

Additional file 2: Table S1. of Association between long interspersed nuclear element-1 methylation levels and relapse in Wilms tumors

Abstract

Extracted data

Additional file 2: Table S1. of Association between long interspersed nuclear element-1 methylation levels and relapse in Wilms tumors

Abstract

Extracted data

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