Additional file 12: Table S7. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Additional file 2: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Table of primer sequences used in experimentation. Primer sequences of genes used RT-qPCR analysis. ...

Additional file 6: Table S4. of Evolutionary history and functional divergence of the cytochrome P450 gene superfamily between Arabidopsis thaliana and Brassica species uncover effects of whole genome and tandem duplications

Jingyin Yu (176516)
Sadia Tehrim (4444294)
Linhai Wang (2548483)
Komivi Dossa (3524930)
Xiurong Zhang (2548480)
Tao Ke (691886)
Boshou Liao (118400)

September 2017

Expression values of cytochrome P450 genes across different tissues among A. thaliana, B. rapa, and ...

Putative cytochrome P450 genes in rice genome (Oryza sativa L. ssp indica) and their EST evidence

Zhong, L
Wang, K
Tan, J
Li, W
Li, SG

January 2002

We discovered 528 putative cytochrome P450s (P450s) in Oryza sativa L. ssp. indica using Arabidopsis...

Additional file 8: Table S3. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

Log-likelihood values and parameters estimates for the CYP71 clan under site-specific models. (PDF 5...

Additional file 9: Table S4. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

Log-likelihood values and parameters estimates for the CYP86 clan under site-specific models. (PDF 5...

Additional file 13: Table S8. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

List of the positively selected sites detected by DATAMONKEY. SLAC: Single likelihood ancestor count...

Additional file 6: Figure S4. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

Phylogenetic relationships and gene structural features of OsCYPs. a A unrooted NJ tree of OsCYPs wa...

Additional file 7: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Table of P450 orthologue gene count in related plants. Comparison of tomato P450 gene along with oth...

Additional file 6: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Tissue specific expression of P450 with FPKM count. Highly expressed tomato P450 genes from heat map...

Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei
Huiqin Chen

January 2018

Abstract Background The cytochrome P450 monooxygenases (CYP450, CYP, P450) catalyze numerous monooxy...

MOESM1 of Genome-wide analysis of cytochrome P450s of Trichoderma spp.: annotation and evolutionary relationships

Sonia Chadha (300210)
Sayaji Mehetre (5332574)
Ravindra Bansal (5332577)
Alan Kuo (260458)
Andrea Aerts (218024)
Igor Grigoriev (760696)
Irina Druzhinina (3492278)
Prasun Mukherjee (1503658)

June 2018

Additional file 1. Table S1: List of Cyp protein entries with incomplete cytochrome P450 domain. Tab...

MOESM7 of The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases

Leander SĂźtzl (6691736)
Gabriel Foley (6691730)
Elizabeth Gillam (6691733)
Mikael BodĂŠn (6627707)
Dietmar Haltrich (104836)

May 2019

Additional file 7: Figure S7. Maximum likelihood tree of all cytochrome domains present in the CDH c...

Additional file 3: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

SlP450 phylogenetic tree inferred using Maximum likelihood method. Phylogenetic tree is constructed ...

Additional file 1: of PROXIMAL: a method for Prediction of Xenobiotic Metabolism

Mona Yousofshahi (3468815)
Sara Manteiga (3468812)
Charmian Wu (3468818)
Kyongbum Lee (197321)
Soha Hassoun (197315)

December 2015

This file includes a list of substrates used in estimating cytochrome P450 enzyme activity. The data...

Additional file 4: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Intron analysis summary. Data for Intron map constructions and distribution. (XLSX 34 kb

Additional file 2: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Table of primer sequences used in experimentation. Primer sequences of genes used RT-qPCR analysis. ...

Additional file 6: Table S4. of Evolutionary history and functional divergence of the cytochrome P450 gene superfamily between Arabidopsis thaliana and Brassica species uncover effects of whole genome and tandem duplications

Jingyin Yu (176516)
Sadia Tehrim (4444294)
Linhai Wang (2548483)
Komivi Dossa (3524930)
Xiurong Zhang (2548480)
Tao Ke (691886)
Boshou Liao (118400)

September 2017

Expression values of cytochrome P450 genes across different tissues among A. thaliana, B. rapa, and ...

Putative cytochrome P450 genes in rice genome (Oryza sativa L. ssp indica) and their EST evidence

Zhong, L
Wang, K
Tan, J
Li, W
Li, SG

January 2002

We discovered 528 putative cytochrome P450s (P450s) in Oryza sativa L. ssp. indica using Arabidopsis...

Additional file 8: Table S3. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

Log-likelihood values and parameters estimates for the CYP71 clan under site-specific models. (PDF 5...

Additional file 9: Table S4. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

Log-likelihood values and parameters estimates for the CYP86 clan under site-specific models. (PDF 5...

Additional file 13: Table S8. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

List of the positively selected sites detected by DATAMONKEY. SLAC: Single likelihood ancestor count...

Additional file 6: Figure S4. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei (594582)
Huiqin Chen (790682)

January 2018

Phylogenetic relationships and gene structural features of OsCYPs. a A unrooted NJ tree of OsCYPs wa...

Additional file 7: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Table of P450 orthologue gene count in related plants. Comparison of tomato P450 gene along with oth...

Additional file 6: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Tissue specific expression of P450 with FPKM count. Highly expressed tomato P450 genes from heat map...

Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Kaifa Wei
Huiqin Chen

January 2018

Abstract Background The cytochrome P450 monooxygenases (CYP450, CYP, P450) catalyze numerous monooxy...

MOESM1 of Genome-wide analysis of cytochrome P450s of Trichoderma spp.: annotation and evolutionary relationships

Sonia Chadha (300210)
Sayaji Mehetre (5332574)
Ravindra Bansal (5332577)
Alan Kuo (260458)
Andrea Aerts (218024)
Igor Grigoriev (760696)
Irina Druzhinina (3492278)
Prasun Mukherjee (1503658)

June 2018

Additional file 1. Table S1: List of Cyp protein entries with incomplete cytochrome P450 domain. Tab...

MOESM7 of The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases

Leander SĂźtzl (6691736)
Gabriel Foley (6691730)
Elizabeth Gillam (6691733)
Mikael BodĂŠn (6627707)
Dietmar Haltrich (104836)

May 2019

Additional file 7: Figure S7. Maximum likelihood tree of all cytochrome domains present in the CDH c...

Additional file 3: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

SlP450 phylogenetic tree inferred using Maximum likelihood method. Phylogenetic tree is constructed ...

Additional file 1: of PROXIMAL: a method for Prediction of Xenobiotic Metabolism

Mona Yousofshahi (3468815)
Sara Manteiga (3468812)
Charmian Wu (3468818)
Kyongbum Lee (197321)
Soha Hassoun (197315)

December 2015

This file includes a list of substrates used in estimating cytochrome P450 enzyme activity. The data...

Additional file 4: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Intron analysis summary. Data for Intron map constructions and distribution. (XLSX 34 kb

Additional file 2: of Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

A. Vasav (6314315)
V. Barvkar (6314318)

February 2019

Table of primer sequences used in experimentation. Primer sequences of genes used RT-qPCR analysis. ...

Additional file 6: Table S4. of Evolutionary history and functional divergence of the cytochrome P450 gene superfamily between Arabidopsis thaliana and Brassica species uncover effects of whole genome and tandem duplications

Jingyin Yu (176516)
Sadia Tehrim (4444294)
Linhai Wang (2548483)
Komivi Dossa (3524930)
Xiurong Zhang (2548480)
Tao Ke (691886)
Boshou Liao (118400)

September 2017

Expression values of cytochrome P450 genes across different tissues among A. thaliana, B. rapa, and ...

Putative cytochrome P450 genes in rice genome (Oryza sativa L. ssp indica) and their EST evidence

Zhong, L
Wang, K
Tan, J
Li, W
Li, SG

January 2002

We discovered 528 putative cytochrome P450s (P450s) in Oryza sativa L. ssp. indica using Arabidopsis...

Additional file 12: Table S7. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Abstract

Extracted data

Additional file 12: Table S7. of Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice

Abstract

Extracted data

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