<p>Mean effective population size is indicated with solid black line, median with dashed line, and 95% highest posterior density (HPD) in shaded grey. Contrasting patterns are present for the two groups; the Columbia River groups visually indicates a reduction in mean effective population size while no such reduction is present for Snake River samples.</p
<p>Bayesian skyline plot (BSP), indicating hypothetical effective population size through time, base...
<p>The x axis is time of mutations per site before present, and the y axis is the expressed populati...
<p>Bayesian skyline plot of historical female effective population size, light lines represent the 9...
<p>A, Bayesian skyline plot of effective population size for CRF01_AE; B, Bayesian skyline plot of e...
<p>BSPs showing changes in effective population size (N<sub>e</sub>*μ) over time (KY). The solid lin...
<p>The TMRCA is the mean root height. The median estimate (bold line), mean (light line) and 95% HPD...
<p>An EBSP was derived for each of the 7 collections which were then plotted on a single graph.</p
<p>Changes in effective population size (millions of individuals on a log scale; Y-axes) are depicte...
<p>In mismatch distributions, dotted lines with circles represent the observed frequency of pairwise...
<p>The X-axis is in units of million years in the past and the Y-axis is <i>N</i><sub>e</sub>*µ (eff...
<p>The dotted horizontal line shows the median estimate of the EBSP and the gray area shows the uppe...
<p><i>X</i> axis: calendar years. <i>Y</i> axis: effective population size. Red lines show the 95% H...
<p>Effective female population size (<i>N<sub>ef</sub></i>), in thousands, multiplied by mean genera...
<p>The y-axis represents the population size (Net) whereas x-axis indicates the time period in years...
<p>A) subtype 2c, B) subtype 2k; X-axis: Date in Years; Y-axis: Estimated effective number of infect...
<p>Bayesian skyline plot (BSP), indicating hypothetical effective population size through time, base...
<p>The x axis is time of mutations per site before present, and the y axis is the expressed populati...
<p>Bayesian skyline plot of historical female effective population size, light lines represent the 9...
<p>A, Bayesian skyline plot of effective population size for CRF01_AE; B, Bayesian skyline plot of e...
<p>BSPs showing changes in effective population size (N<sub>e</sub>*μ) over time (KY). The solid lin...
<p>The TMRCA is the mean root height. The median estimate (bold line), mean (light line) and 95% HPD...
<p>An EBSP was derived for each of the 7 collections which were then plotted on a single graph.</p
<p>Changes in effective population size (millions of individuals on a log scale; Y-axes) are depicte...
<p>In mismatch distributions, dotted lines with circles represent the observed frequency of pairwise...
<p>The X-axis is in units of million years in the past and the Y-axis is <i>N</i><sub>e</sub>*µ (eff...
<p>The dotted horizontal line shows the median estimate of the EBSP and the gray area shows the uppe...
<p><i>X</i> axis: calendar years. <i>Y</i> axis: effective population size. Red lines show the 95% H...
<p>Effective female population size (<i>N<sub>ef</sub></i>), in thousands, multiplied by mean genera...
<p>The y-axis represents the population size (Net) whereas x-axis indicates the time period in years...
<p>A) subtype 2c, B) subtype 2k; X-axis: Date in Years; Y-axis: Estimated effective number of infect...
<p>Bayesian skyline plot (BSP), indicating hypothetical effective population size through time, base...
<p>The x axis is time of mutations per site before present, and the y axis is the expressed populati...
<p>Bayesian skyline plot of historical female effective population size, light lines represent the 9...