Add to ORKGDescription This package detects statistically significant difference between read enrichment profiles in different ChIP-Seq samples. To take advan-tage of shape differences it uses Kernel methods (Maximum Mean Discrepancy, MMD). biocViews ChIPseq, MultipleComparison
MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple...
Background: A number of statistical models has been proposed for studying the association between ge...
ChIP-chip is a microarray based technology for determining the genomic locations of chromatin bound ...
Description Statistical tools for ChIP-seq data analysis. The package includes the statistical metho...
Description This package provides a framework for the visualization of genome coverage profiles. It ...
ChIP-Seq has rapidly become the dominant experimental technique in functional genomic and epigenomic...
Additional file 5: Table S1. Percentage difference between H3K27ac density curves (Fig. 3A) in the t...
A mechanistic basis for amplification differences between samples and between genome region
<div><p>ChIP-seq is increasingly being used for genome-wide profiling of histone modification marks....
This dissertation addresses the statistical problems related to multiple-sample copy number variants...
Motivation: ChIP-chip and ChIP-seq technologies provide genome-wide measurements of various types of...
MOTIVATION: ChIP-chip and ChIP-seq technologies provide genome-wide measurements of various types of...
ChIP-seq is increasingly being used for genome-wide profiling of histone modification marks. It is o...
This dissertation addresses the statistical problems related to multiple-sample copy number variants...
The ChIP-chip and ChIP-seq techniques enable genome-wide mapping of in vivo protein-DNA interactions...
MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple...
Background: A number of statistical models has been proposed for studying the association between ge...
ChIP-chip is a microarray based technology for determining the genomic locations of chromatin bound ...
Description Statistical tools for ChIP-seq data analysis. The package includes the statistical metho...
Description This package provides a framework for the visualization of genome coverage profiles. It ...
ChIP-Seq has rapidly become the dominant experimental technique in functional genomic and epigenomic...
Additional file 5: Table S1. Percentage difference between H3K27ac density curves (Fig. 3A) in the t...
A mechanistic basis for amplification differences between samples and between genome region
<div><p>ChIP-seq is increasingly being used for genome-wide profiling of histone modification marks....
This dissertation addresses the statistical problems related to multiple-sample copy number variants...
Motivation: ChIP-chip and ChIP-seq technologies provide genome-wide measurements of various types of...
MOTIVATION: ChIP-chip and ChIP-seq technologies provide genome-wide measurements of various types of...
ChIP-seq is increasingly being used for genome-wide profiling of histone modification marks. It is o...
This dissertation addresses the statistical problems related to multiple-sample copy number variants...
The ChIP-chip and ChIP-seq techniques enable genome-wide mapping of in vivo protein-DNA interactions...
MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple...
Background: A number of statistical models has been proposed for studying the association between ge...
ChIP-chip is a microarray based technology for determining the genomic locations of chromatin bound ...