Additional file 3: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Additional file 5: of The expression profile of human peripheral blood mononuclear cell miRNA is altered by antibody-dependent enhancement of infection with dengue virus serotype 3

Liming Jiang (300422)
Qiangming Sun (286760)

March 2018

Table S3. The total count, differential count, GO Name and P Value of enrichedGO terms among DENV-3–...

Additional file 2: Figure S1. of Patterns and causes of liver involvement in acute dengue infection

Samitha Fernando (663503)
Ananda Wijewickrama (3482156)
Laksiri Gomes (296923)
Chameera Punchihewa (3482165)
S. Madusanka (3482162)
Harsha Dissanayake (3482159)
Chandima Jeewandara (455011)
Hemantha Peiris (3482171)
Graham Ogg (341111)
Gathsaurie Malavige (3482168)

July 2016

Standard curves for determining viral loads. A: standard curve for DENV-1. B: standard curve for DEN...

Kinetics of dengue virus-specific serum immunoglobulin classes and subclasses correlate with clinical outcome of infection.

Koraka, Penelope
Suharti, Catarina
Setiati, Tatty
Mairuhu, A.T.A.
Gorp, Eric
Hack, Erik
Juffrie, M.
Sutaryo, J.
Meer, G.M.
Groen, Jan
Osterhaus, Albert

December 2001

textabstractThe kinetics of dengue virus (DEN)-specific serum immunoglobulin classes (immunoglobulin...

Additional file 8: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Elizabeth Godoy-Lozano (3578762)
Juan Téllez-Sosa (429748)
Gilberto Sánchez-González (2578765)
Hugo Sámano-Sánchez (3578756)
Andrés Aguilar-Salgado (3578765)
Aarón Salinas-Rodríguez (518220)
Bernardo Cortina-Ceballos (3172569)
Héctor Vivanco-Cid (3579482)
Karina Hernández-Flores (3579473)
Jennifer Pfaff (3579476)
Kristen Kahle (3579479)
Benjamin Doranz (3579485)
Rosa Gómez-Barreto (3578759)
Humberto Valdovinos-Torres (429750)
Irma López-Martínez (606285)
Mario Rodriguez (2630947)
Jesús Martínez-Barnetche (429756)

February 2016

Digital CDRH3 “spectratyping” of acute phase DENV infection. CDRH3 “spectratyping” of all segments a...

Additional file 5: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Elizabeth Godoy-Lozano (3578762)
Juan Téllez-Sosa (429748)
Gilberto Sánchez-González (2578765)
Hugo Sámano-Sánchez (3578756)
Andrés Aguilar-Salgado (3578765)
Aarón Salinas-Rodríguez (518220)
Bernardo Cortina-Ceballos (3172569)
Héctor Vivanco-Cid (3579482)
Karina Hernández-Flores (3579473)
Jennifer Pfaff (3579476)
Kristen Kahle (3579479)
Benjamin Doranz (3579485)
Rosa Gómez-Barreto (3578759)
Humberto Valdovinos-Torres (429750)
Irma López-Martínez (606285)
Mario Rodriguez (2630947)
Jesús Martínez-Barnetche (429756)

February 2016

Reads, clonal groups, and lineages numbers per individual and condition. The table shows the number ...

Additional file 7: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Elizabeth Godoy-Lozano (3578762)
Juan Téllez-Sosa (429748)
Gilberto Sánchez-González (2578765)
Hugo Sámano-Sánchez (3578756)
Andrés Aguilar-Salgado (3578765)
Aarón Salinas-Rodríguez (518220)
Bernardo Cortina-Ceballos (3172569)
Héctor Vivanco-Cid (3579482)
Karina Hernández-Flores (3579473)
Jennifer Pfaff (3579476)
Kristen Kahle (3579479)
Benjamin Doranz (3579485)
Rosa Gómez-Barreto (3578759)
Humberto Valdovinos-Torres (429750)
Irma López-Martínez (606285)
Mario Rodriguez (2630947)
Jesús Martínez-Barnetche (429756)

February 2016

Preferential IGHV transcription and usage during acute DENV infection. (A). Heat map of hierarchical...

Additional file 2: Figure S2. of Dengue virus infection-enhancement activity in neutralizing antibodies of healthy adults before dengue season as determined by using FcγR-expressing cells

Minh Ly (4753419)
Meng Moi (3581732)
Thi Vu (3465206)
Mya Tun (4753422)
Todd Saunders (4753431)
Cam Nguyen (4753428)
Anh Nguyen (2401660)
Hung Nguyen (792999)
Than Dao (4753425)
Do Pham (4753416)
Thi Nguyen (2455318)
Thi Le (3506186)
Futoshi Hasebe (4753413)
Kouichi Morita (201947)

January 2018

Neutralizing antibody (N.A) profile in serum samples obtained from 18 individuals who were DENV IgG ...

Additional file 1: of Dengue virus-like particles mimic the antigenic properties of the infectious dengue virus envelope

Stefan Metz (1522909)
Ashlie Thomas (5049497)
Laura White (3115770)
Mark Stoops (5049494)
Markus Corten (5049491)
Holger Hannemann (542986)
Aravinda de Silva (415190)

April 2018

Normalized antibody binding to DENV virus particles and VLPs. The binding of each mAb to virus (blac...

Additional file 2: of Genotype-specific and cross-reactive neutralizing antibodies induced by dengue virus infection: detection of antibodies with different levels of neutralizing activities against homologous and heterologous genotypes of dengue virus type 2 in common marmosets (Callithrix jacchus)

Nor Azami (5023367)
Meng Moi (3581732)
Yasushi Ami (567169)
Yuriko Suzaki (5023364)
Chang-Kweng Lim (181621)
Satoshi Taniguchi (542664)
Masayuki Saijo (324701)
Tomohiko Takasaki (181625)
Ichiro Kurane (181627)

March 2018

Levels of IgM antibody in plasma samples of the marmosets according to the group and type of infecti...

Additional file 2: of Immunogenicity of the CYD tetravalent dengue vaccine using an accelerated schedule: randomised phase II study in US adults

Judith Kirstein (5779322)
William Douglas (5779325)
Manoj Thakur (3188073)
Mark Boaz (254198)
Thomas Papa (5779328)
Anna Skipetrova (3153648)
Eric Plennevaux (5779331)

September 2018

Results. SAEs during the trial considered related to vaccination. Additional information on the SAEs...

Additional file 1: of Immunogenicity of the CYD tetravalent dengue vaccine using an accelerated schedule: randomised phase II study in US adults

Judith Kirstein (5779322)
William Douglas (5779325)
Manoj Thakur (3188073)
Mark Boaz (254198)
Thomas Papa (5779328)
Anna Skipetrova (3153648)
Eric Plennevaux (5779331)

September 2018

Methods. PRNT assay. Additional information on the methods for the PRNT assay and serostatus at base...

MOESM2 of Aberrant monocyte responses predict and characterize dengue virus infection in individuals with severe disease

Yean Yong (4058455)
Hong Tan (472478)
Soe Jen (4058458)
Esaki Shankar (4058452)
Santha Natkunam (4058449)
Jameela Sathar (538558)
Rishya Manikam (292939)
Shamala Sekaran (3853327)

May 2017

Additional file 2: Figure S1. (A) Plasma levels IL-18BPa and free circulating IL-18 in dengue patien...

Additional file 2: Figure S2. of High frequency of pre-existing neutralizing antibody responses in patients with dengue during an outbreak in Central Brazil

Angela de Teive e Argolo (3407324)
Valéria de Rezende Féres (3407303)
Marli Cordeiro (3407306)
Lucimeire da Silveira (3407318)
Adriana Guilarde (3407321)
Ernesto de Azevedo Marques (3407309)
Wayner de Souza (3407312)
Celina Martelli (3407315)

October 2016

Difference between PRNT50 titers paired samples. Boxes encompass 50 % of the distribution; line repr...

Additional file 2: of One-step real-time RT-PCR assays for serotyping dengue virus in clinical samples

Erik Alm (676589)
Gunnel Lindegren (676591)
Kerstin Falk (1235421)
Nina Lagerqvist (676593)

November 2015

Overview of the theoretical specificity towards non-targeted serotypes. The sequences of the primers...

Additional file 1: of Evaluation of an immunochromatography rapid diagnosis kit for detection of chikungunya virus antigen in India, a dengue-endemic country

Jaspreet Jain (507785)
Tamaki Okabayashi (460054)
Navjot Kaur (550835)
Emi Nakayama (3401096)
Tatsuo Shioda (126910)
Rajni Gaind (3473702)
Takeshi Kurosu (538717)
Sujatha Sunil (33948)

May 2018

Figure file explaining the flow chart of sample collection and testing. The flow chart shows the num...

Additional file 5: of The expression profile of human peripheral blood mononuclear cell miRNA is altered by antibody-dependent enhancement of infection with dengue virus serotype 3

Liming Jiang (300422)
Qiangming Sun (286760)

March 2018

Table S3. The total count, differential count, GO Name and P Value of enrichedGO terms among DENV-3–...

Additional file 2: Figure S1. of Patterns and causes of liver involvement in acute dengue infection

Samitha Fernando (663503)
Ananda Wijewickrama (3482156)
Laksiri Gomes (296923)
Chameera Punchihewa (3482165)
S. Madusanka (3482162)
Harsha Dissanayake (3482159)
Chandima Jeewandara (455011)
Hemantha Peiris (3482171)
Graham Ogg (341111)
Gathsaurie Malavige (3482168)

July 2016

Standard curves for determining viral loads. A: standard curve for DENV-1. B: standard curve for DEN...

Kinetics of dengue virus-specific serum immunoglobulin classes and subclasses correlate with clinical outcome of infection.

Koraka, Penelope
Suharti, Catarina
Setiati, Tatty
Mairuhu, A.T.A.
Gorp, Eric
Hack, Erik
Juffrie, M.
Sutaryo, J.
Meer, G.M.
Groen, Jan
Osterhaus, Albert

December 2001

textabstractThe kinetics of dengue virus (DEN)-specific serum immunoglobulin classes (immunoglobulin...

Additional file 8: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Elizabeth Godoy-Lozano (3578762)
Juan Téllez-Sosa (429748)
Gilberto Sánchez-González (2578765)
Hugo Sámano-Sánchez (3578756)
Andrés Aguilar-Salgado (3578765)
Aarón Salinas-Rodríguez (518220)
Bernardo Cortina-Ceballos (3172569)
Héctor Vivanco-Cid (3579482)
Karina Hernández-Flores (3579473)
Jennifer Pfaff (3579476)
Kristen Kahle (3579479)
Benjamin Doranz (3579485)
Rosa Gómez-Barreto (3578759)
Humberto Valdovinos-Torres (429750)
Irma López-Martínez (606285)
Mario Rodriguez (2630947)
Jesús Martínez-Barnetche (429756)

February 2016

Digital CDRH3 “spectratyping” of acute phase DENV infection. CDRH3 “spectratyping” of all segments a...

Additional file 5: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Elizabeth Godoy-Lozano (3578762)
Juan Téllez-Sosa (429748)
Gilberto Sánchez-González (2578765)
Hugo Sámano-Sánchez (3578756)
Andrés Aguilar-Salgado (3578765)
Aarón Salinas-Rodríguez (518220)
Bernardo Cortina-Ceballos (3172569)
Héctor Vivanco-Cid (3579482)
Karina Hernández-Flores (3579473)
Jennifer Pfaff (3579476)
Kristen Kahle (3579479)
Benjamin Doranz (3579485)
Rosa Gómez-Barreto (3578759)
Humberto Valdovinos-Torres (429750)
Irma López-Martínez (606285)
Mario Rodriguez (2630947)
Jesús Martínez-Barnetche (429756)

February 2016

Reads, clonal groups, and lineages numbers per individual and condition. The table shows the number ...

Additional file 7: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Elizabeth Godoy-Lozano (3578762)
Juan Téllez-Sosa (429748)
Gilberto Sánchez-González (2578765)
Hugo Sámano-Sánchez (3578756)
Andrés Aguilar-Salgado (3578765)
Aarón Salinas-Rodríguez (518220)
Bernardo Cortina-Ceballos (3172569)
Héctor Vivanco-Cid (3579482)
Karina Hernández-Flores (3579473)
Jennifer Pfaff (3579476)
Kristen Kahle (3579479)
Benjamin Doranz (3579485)
Rosa Gómez-Barreto (3578759)
Humberto Valdovinos-Torres (429750)
Irma López-Martínez (606285)
Mario Rodriguez (2630947)
Jesús Martínez-Barnetche (429756)

February 2016

Preferential IGHV transcription and usage during acute DENV infection. (A). Heat map of hierarchical...

Additional file 2: Figure S2. of Dengue virus infection-enhancement activity in neutralizing antibodies of healthy adults before dengue season as determined by using FcγR-expressing cells

Minh Ly (4753419)
Meng Moi (3581732)
Thi Vu (3465206)
Mya Tun (4753422)
Todd Saunders (4753431)
Cam Nguyen (4753428)
Anh Nguyen (2401660)
Hung Nguyen (792999)
Than Dao (4753425)
Do Pham (4753416)
Thi Nguyen (2455318)
Thi Le (3506186)
Futoshi Hasebe (4753413)
Kouichi Morita (201947)

January 2018

Neutralizing antibody (N.A) profile in serum samples obtained from 18 individuals who were DENV IgG ...

Additional file 1: of Dengue virus-like particles mimic the antigenic properties of the infectious dengue virus envelope

Stefan Metz (1522909)
Ashlie Thomas (5049497)
Laura White (3115770)
Mark Stoops (5049494)
Markus Corten (5049491)
Holger Hannemann (542986)
Aravinda de Silva (415190)

April 2018

Normalized antibody binding to DENV virus particles and VLPs. The binding of each mAb to virus (blac...

Additional file 2: of Genotype-specific and cross-reactive neutralizing antibodies induced by dengue virus infection: detection of antibodies with different levels of neutralizing activities against homologous and heterologous genotypes of dengue virus type 2 in common marmosets (Callithrix jacchus)

Nor Azami (5023367)
Meng Moi (3581732)
Yasushi Ami (567169)
Yuriko Suzaki (5023364)
Chang-Kweng Lim (181621)
Satoshi Taniguchi (542664)
Masayuki Saijo (324701)
Tomohiko Takasaki (181625)
Ichiro Kurane (181627)

March 2018

Levels of IgM antibody in plasma samples of the marmosets according to the group and type of infecti...

Additional file 2: of Immunogenicity of the CYD tetravalent dengue vaccine using an accelerated schedule: randomised phase II study in US adults

Judith Kirstein (5779322)
William Douglas (5779325)
Manoj Thakur (3188073)
Mark Boaz (254198)
Thomas Papa (5779328)
Anna Skipetrova (3153648)
Eric Plennevaux (5779331)

September 2018

Results. SAEs during the trial considered related to vaccination. Additional information on the SAEs...

Additional file 1: of Immunogenicity of the CYD tetravalent dengue vaccine using an accelerated schedule: randomised phase II study in US adults

Judith Kirstein (5779322)
William Douglas (5779325)
Manoj Thakur (3188073)
Mark Boaz (254198)
Thomas Papa (5779328)
Anna Skipetrova (3153648)
Eric Plennevaux (5779331)

September 2018

Methods. PRNT assay. Additional information on the methods for the PRNT assay and serostatus at base...

MOESM2 of Aberrant monocyte responses predict and characterize dengue virus infection in individuals with severe disease

Yean Yong (4058455)
Hong Tan (472478)
Soe Jen (4058458)
Esaki Shankar (4058452)
Santha Natkunam (4058449)
Jameela Sathar (538558)
Rishya Manikam (292939)
Shamala Sekaran (3853327)

May 2017

Additional file 2: Figure S1. (A) Plasma levels IL-18BPa and free circulating IL-18 in dengue patien...

Additional file 2: Figure S2. of High frequency of pre-existing neutralizing antibody responses in patients with dengue during an outbreak in Central Brazil

Angela de Teive e Argolo (3407324)
Valéria de Rezende Féres (3407303)
Marli Cordeiro (3407306)
Lucimeire da Silveira (3407318)
Adriana Guilarde (3407321)
Ernesto de Azevedo Marques (3407309)
Wayner de Souza (3407312)
Celina Martelli (3407315)

October 2016

Difference between PRNT50 titers paired samples. Boxes encompass 50 % of the distribution; line repr...

Additional file 2: of One-step real-time RT-PCR assays for serotyping dengue virus in clinical samples

Erik Alm (676589)
Gunnel Lindegren (676591)
Kerstin Falk (1235421)
Nina Lagerqvist (676593)

November 2015

Overview of the theoretical specificity towards non-targeted serotypes. The sequences of the primers...

Additional file 1: of Evaluation of an immunochromatography rapid diagnosis kit for detection of chikungunya virus antigen in India, a dengue-endemic country

Jaspreet Jain (507785)
Tamaki Okabayashi (460054)
Navjot Kaur (550835)
Emi Nakayama (3401096)
Tatsuo Shioda (126910)
Rajni Gaind (3473702)
Takeshi Kurosu (538717)
Sujatha Sunil (33948)

May 2018

Figure file explaining the flow chart of sample collection and testing. The flow chart shows the num...

Additional file 5: of The expression profile of human peripheral blood mononuclear cell miRNA is altered by antibody-dependent enhancement of infection with dengue virus serotype 3

Liming Jiang (300422)
Qiangming Sun (286760)

March 2018

Table S3. The total count, differential count, GO Name and P Value of enrichedGO terms among DENV-3–...

Additional file 2: Figure S1. of Patterns and causes of liver involvement in acute dengue infection

Samitha Fernando (663503)
Ananda Wijewickrama (3482156)
Laksiri Gomes (296923)
Chameera Punchihewa (3482165)
S. Madusanka (3482162)
Harsha Dissanayake (3482159)
Chandima Jeewandara (455011)
Hemantha Peiris (3482171)
Graham Ogg (341111)
Gathsaurie Malavige (3482168)

July 2016

Standard curves for determining viral loads. A: standard curve for DENV-1. B: standard curve for DEN...

Kinetics of dengue virus-specific serum immunoglobulin classes and subclasses correlate with clinical outcome of infection.

Koraka, Penelope
Suharti, Catarina
Setiati, Tatty
Mairuhu, A.T.A.
Gorp, Eric
Hack, Erik
Juffrie, M.
Sutaryo, J.
Meer, G.M.
Groen, Jan
Osterhaus, Albert

December 2001

textabstractThe kinetics of dengue virus (DEN)-specific serum immunoglobulin classes (immunoglobulin...

Additional file 3: of Lower IgG somatic hypermutation rates during acute dengue virus infection is compatible with a germinal center-independent B cell response

Abstract

Extracted data

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