Despite advances in sequencing technology, there are still significant numbers of well-characterized enzymatic activities for which there are no known associated sequences. These 'orphan enzymes' represent glaring holes in our biological understanding, and it is a top priority to reunite them with their coding sequences. Here we report a methodology for resolving orphan enzymes through a combination of database search and literature review. Using this method we were able to reconnect over 270 orphan enzymes with their corresponding sequence. This success points toward how we can systematically eliminate the remaining orphan enzymes and prevent the introduction of future orphan enzymes
International audienceOf all biochemically characterized metabolic reactions formalized by the IUBMB...
Of all biochemically characterized metabolic reactions formalized by the IUBMB, over one out of four...
Of all biochemically characterized metabolic reactions formalized by the IUBMB, over one out of four...
<div><p>Despite advances in sequencing technology, there are still significant numbers of well-chara...
Abstract Background Using computational database searches, we have demonstrated previously that no g...
The power of genome sequencing depends on the ability to understand what those genes and their prote...
<p>Beginning with a putative orphan enzyme (POE) (yellow), an investigator can maximize the likeliho...
The power of genome sequencing depends on the ability to understand what those genes and their prote...
Abstract Background Despite the current availability of several hundreds of thousands of amino acid ...
SummaryThe rate at which new genes are being sequenced greatly exceeds our ability to correctly anno...
The rate at which new genes are being sequenced greatly exceeds our ability to correctly annotate th...
<p>Each putative orphan was evaluated via a multistep process relying on sequence databases, the lit...
<p>Amino acid sequence information connects knowledge about protein function in major databases (blu...
<p>Starting from an enzyme activity that has been characterized in the lab (gray), there are three m...
Recent advances in synthetic biochemistry have resulted in a wealth of de novo hypothetical enzymati...
International audienceOf all biochemically characterized metabolic reactions formalized by the IUBMB...
Of all biochemically characterized metabolic reactions formalized by the IUBMB, over one out of four...
Of all biochemically characterized metabolic reactions formalized by the IUBMB, over one out of four...
<div><p>Despite advances in sequencing technology, there are still significant numbers of well-chara...
Abstract Background Using computational database searches, we have demonstrated previously that no g...
The power of genome sequencing depends on the ability to understand what those genes and their prote...
<p>Beginning with a putative orphan enzyme (POE) (yellow), an investigator can maximize the likeliho...
The power of genome sequencing depends on the ability to understand what those genes and their prote...
Abstract Background Despite the current availability of several hundreds of thousands of amino acid ...
SummaryThe rate at which new genes are being sequenced greatly exceeds our ability to correctly anno...
The rate at which new genes are being sequenced greatly exceeds our ability to correctly annotate th...
<p>Each putative orphan was evaluated via a multistep process relying on sequence databases, the lit...
<p>Amino acid sequence information connects knowledge about protein function in major databases (blu...
<p>Starting from an enzyme activity that has been characterized in the lab (gray), there are three m...
Recent advances in synthetic biochemistry have resulted in a wealth of de novo hypothetical enzymati...
International audienceOf all biochemically characterized metabolic reactions formalized by the IUBMB...
Of all biochemically characterized metabolic reactions formalized by the IUBMB, over one out of four...
Of all biochemically characterized metabolic reactions formalized by the IUBMB, over one out of four...