We present molecular dynamics simulations of glutamic acid and glutamate solvated in water, using both density functional theory (DFT) and the Gromos96 force field. We focus on the microscopic aspects of the solvation−particularly on the hydrogen bond structures and dynamics−and investigate the influence of the protonation state and of the simulation method. Radial distribution functions show that the hydrogen bonds are longer in the force field systems. We find that the partial charges of the solutes in the force field simulations are lower than the localized electron densities for the quantum simulations. This lower polarization decreases the hydrogen bond strength. Protonation of the carboxylate group renders glutamic acid a very strong ...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
Molecular dynamics studies have been performed on the zwitterionic form of the dipeptide glycine-ala...
Density functional theory (DFT) based Car–Parrinello molecular dynamics (CPMD) simulations were carr...
The structure and dynamics of aqueous solvation of ethanol and ethylene are studied by density funct...
Density functional theory (DFT) based Car–Parrinello molecular dynamics (CPMD) simulations were carr...
Aqueous solvation of carboxylate groups, as present in the glycine zwitterion and the dipeptide aspa...
Biomolecular systems, in particular those involving proteins and their constituents, have been the f...
Molecular dynamics (MD) simulations studies have been performed on the aqueous solvation of the dipe...
In molecular mechanics simulations of biological systems, the solvation water is typically represent...
Recent years have witnessed a renewed interest in statistical mechanics of solvation directed toward...
We compare the conformational distributions of Ace-Ala-Nme and Ace-Gly-Nme sampled in long simulatio...
Recent years have witnessed a renewed interest in statistical mechanics of solvation directed toward...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
Molecular dynamics studies have been performed on the zwitterionic form of the dipeptide glycine-ala...
Density functional theory (DFT) based Car–Parrinello molecular dynamics (CPMD) simulations were carr...
The structure and dynamics of aqueous solvation of ethanol and ethylene are studied by density funct...
Density functional theory (DFT) based Car–Parrinello molecular dynamics (CPMD) simulations were carr...
Aqueous solvation of carboxylate groups, as present in the glycine zwitterion and the dipeptide aspa...
Biomolecular systems, in particular those involving proteins and their constituents, have been the f...
Molecular dynamics (MD) simulations studies have been performed on the aqueous solvation of the dipe...
In molecular mechanics simulations of biological systems, the solvation water is typically represent...
Recent years have witnessed a renewed interest in statistical mechanics of solvation directed toward...
We compare the conformational distributions of Ace-Ala-Nme and Ace-Gly-Nme sampled in long simulatio...
Recent years have witnessed a renewed interest in statistical mechanics of solvation directed toward...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...
International audienceMost chemical (or biochemical) reactions take place in a liquid solvent. Water...