Add to ORKGSummary: We make available a large cross-comparison for 16 of the completely sequenced genomes and additional eukaryotic genes. The alignments were performed at the protein level using liberal similarity bounds in order to capture as many significant alignments as possible. This dataset will be updated as new genomes become available. Availability: The dataset is accessible at http://cbrg.inf.ethz.ch/AllAllGeneAlign.html Contact: hallett@inf.ethz.ch * To whom correspondence should be addresse
International audienceBackground: Comparative genomics is a central step in many sequence analysis s...
This paper describes a framework and a high-level language toolkit for comparative analysis of genom...
[[abstract]]Identifying protein coding genes is one of most important task in newly sequenced genome...
Genome alignments provide a powerful basis to transfer gene annotations from a well-annotated refere...
Genome alignments provide a powerful basis to transfer gene annotations from a well-annotated refere...
Advances in high throughput genome sequencing has presented an opportunity to study how species are ...
Background Identification of homologous regions or conserved syntenies across genomes is one crucial...
Taher L, Rinner O, Garg S, Sczyrba A, Morgenstern B. AGenDA: gene prediction by cross-species sequen...
Automatic gene prediction is one of the major challenges in computational sequence analysis. Traditi...
The availability of the assembled mouse genome makes possible, for the first time, an alignment and...
Abstract. We present an approach of pairwise genomes comparison which avoids the step of identicatio...
Abstract Background Eukaryotic whole genome sequences are accumulating at an impressive rate. Effect...
Evolution provides the unifying framework with which to understand biology. The coherent investigati...
Interpreting the functional content of a given genomic sequence is one of the central challenges of ...
Broadly, computational approaches for ortholog assignment is a three steps process: (i) identify all...
International audienceBackground: Comparative genomics is a central step in many sequence analysis s...
This paper describes a framework and a high-level language toolkit for comparative analysis of genom...
[[abstract]]Identifying protein coding genes is one of most important task in newly sequenced genome...
Genome alignments provide a powerful basis to transfer gene annotations from a well-annotated refere...
Genome alignments provide a powerful basis to transfer gene annotations from a well-annotated refere...
Advances in high throughput genome sequencing has presented an opportunity to study how species are ...
Background Identification of homologous regions or conserved syntenies across genomes is one crucial...
Taher L, Rinner O, Garg S, Sczyrba A, Morgenstern B. AGenDA: gene prediction by cross-species sequen...
Automatic gene prediction is one of the major challenges in computational sequence analysis. Traditi...
The availability of the assembled mouse genome makes possible, for the first time, an alignment and...
Abstract. We present an approach of pairwise genomes comparison which avoids the step of identicatio...
Abstract Background Eukaryotic whole genome sequences are accumulating at an impressive rate. Effect...
Evolution provides the unifying framework with which to understand biology. The coherent investigati...
Interpreting the functional content of a given genomic sequence is one of the central challenges of ...
Broadly, computational approaches for ortholog assignment is a three steps process: (i) identify all...
International audienceBackground: Comparative genomics is a central step in many sequence analysis s...
This paper describes a framework and a high-level language toolkit for comparative analysis of genom...
[[abstract]]Identifying protein coding genes is one of most important task in newly sequenced genome...