Proton exchange between titratable amino acid residues and the surrounding solution gives rise to exciting electric processes in proteins. We present a proton titration scheme for studying acid-base equilibria in Metropolis Monte Carlo simulations where salt is treated at the Debye-Huckel level. The method, rooted in the Kirkwood model of impenetrable spheres, is applied on the three milk proteins alpha-lactalbumin, beta-lactoglobulin, and lactoferrin, for which we investigate the net-charge, molecular dipole moment, and charge capacitance. Over a wide range of pH and salt conditions, excellent agreement is found with more elaborate simulations where salt is explicitly included. The implicit salt scheme is orders of magnitude faster than th...
Electrostatic interactions in bio-molecular systems are important not only in the living cell but al...
AbstractThe accurate and efficient treatment of electrostatic interactions is one of the challenging...
International audienceTitratable residues determine the acid/base behavior of proteins, strongly inf...
pH is a key parameter for technological and biological processes, intimately related to biomolecular...
A central problem in computational biophysics is the treatment of titratable residues in molecular d...
The pH dependent properties of proteins can be successfully modeled using continuum electrostatic me...
International audienceThe acid/base properties of proteins are essential in biochemistry, and proton...
The stability of aqueous protein solutions is strongly affected by multivalent ions, which induce io...
In this work, the molecular interaction between the protein β-lactoglobulin and strong polyelectroly...
In this work, we deliver a proof of concept for a fast method that introduces pH effects into classi...
The interplay between the biocolloidal characteristics (especially size and charge), pH, salt concen...
International audienceIonizable residues play important roles in protein structure and activity, and...
213 p.Thesis (Ph.D.)--University of Illinois at Urbana-Champaign, 2005.Many biochemical reactions ar...
Molecular dynamics (MD) simulations have become a key tool for examining the properties of electrosp...
Oblivious to ion specificity, pH has been a key parameter for macromolecular solutions for little mo...
Electrostatic interactions in bio-molecular systems are important not only in the living cell but al...
AbstractThe accurate and efficient treatment of electrostatic interactions is one of the challenging...
International audienceTitratable residues determine the acid/base behavior of proteins, strongly inf...
pH is a key parameter for technological and biological processes, intimately related to biomolecular...
A central problem in computational biophysics is the treatment of titratable residues in molecular d...
The pH dependent properties of proteins can be successfully modeled using continuum electrostatic me...
International audienceThe acid/base properties of proteins are essential in biochemistry, and proton...
The stability of aqueous protein solutions is strongly affected by multivalent ions, which induce io...
In this work, the molecular interaction between the protein β-lactoglobulin and strong polyelectroly...
In this work, we deliver a proof of concept for a fast method that introduces pH effects into classi...
The interplay between the biocolloidal characteristics (especially size and charge), pH, salt concen...
International audienceIonizable residues play important roles in protein structure and activity, and...
213 p.Thesis (Ph.D.)--University of Illinois at Urbana-Champaign, 2005.Many biochemical reactions ar...
Molecular dynamics (MD) simulations have become a key tool for examining the properties of electrosp...
Oblivious to ion specificity, pH has been a key parameter for macromolecular solutions for little mo...
Electrostatic interactions in bio-molecular systems are important not only in the living cell but al...
AbstractThe accurate and efficient treatment of electrostatic interactions is one of the challenging...
International audienceTitratable residues determine the acid/base behavior of proteins, strongly inf...