Because estuaries are dynamic on many temporal scales, it is difficult to differentiate long-term shifts from those resulting from erratic pulse events like severe storms. Diatoms are abundant and diverse in estuaries, and may characterize these dynamics across relevant time scales. The climate of south Florida is subtropical, with dry winters and wet summers that may also harbor tropical storms and cyclones. We investigated whether these repeated seasonal drivers of change in estuaries differ from the influence of tropical cyclones on planktonic and benthic diatom assemblages. Diatom assemblages and environmental parameters were measured in the Charlotte Harbor watershed of southwest Florida to identify differences between the wet and dry ...