BarraCUDA uses CUDA graphics cards to map DNA reads to the human genome. Previously its software source code was genetically improved for short paired end next generation sequences. On longer noisy epigenetics strings using nVidia Titan and twin Tesla K40 the same GI-ed code is more than 3 times faster than bwa-meth on an 8 core CPU
The use of Bioinformatic tools in routine clinical diagnostics is still facing a number of issues. T...
M.Ing. (Electrical And Electronic Engineering)Bioinformatics is one of the most rapidly advancing sc...
Millions of short sequences are produced because of the introduction of next-generation sequencing t...
Background: BarraCUDA is an open source C program which uses the BWA algorithm in parallel with nV...
High-throughput DNA sequencing (HTS) instruments today are capable of generating millions of sequenc...
BACKGROUND: With the maturation of next-generation DNA sequencing (NGS) technologies, the throughput...
Abstract Background With the maturation of next-generation DNA sequencing (NGS) technologies, the th...
k-mer counting is a popular pre-processing step in many bioinformatic algorithms. KMC2 is one of the...
Over the past few years, DNA sequencing technology has been advancing at such a fast pace that compu...
AbstractGenotype imputation is an important approach for improving the power of genome-wide associat...
Cytosine DNA methylation is an epigenetic mark implicated in several biological processes. Bisulfite...
Next Generation Sequencing techniques have resulted in an exponential growth in the generation of ge...
Motivation: Collecting millions of genetic variations is feasible with the advanced genotyping techn...
Over the last decades, the availability of genetic data has exploded and genomic information is wide...
A GPU is used to datamine five million correlations between probes within Affymetrix HG-U133A probes...
The use of Bioinformatic tools in routine clinical diagnostics is still facing a number of issues. T...
M.Ing. (Electrical And Electronic Engineering)Bioinformatics is one of the most rapidly advancing sc...
Millions of short sequences are produced because of the introduction of next-generation sequencing t...
Background: BarraCUDA is an open source C program which uses the BWA algorithm in parallel with nV...
High-throughput DNA sequencing (HTS) instruments today are capable of generating millions of sequenc...
BACKGROUND: With the maturation of next-generation DNA sequencing (NGS) technologies, the throughput...
Abstract Background With the maturation of next-generation DNA sequencing (NGS) technologies, the th...
k-mer counting is a popular pre-processing step in many bioinformatic algorithms. KMC2 is one of the...
Over the past few years, DNA sequencing technology has been advancing at such a fast pace that compu...
AbstractGenotype imputation is an important approach for improving the power of genome-wide associat...
Cytosine DNA methylation is an epigenetic mark implicated in several biological processes. Bisulfite...
Next Generation Sequencing techniques have resulted in an exponential growth in the generation of ge...
Motivation: Collecting millions of genetic variations is feasible with the advanced genotyping techn...
Over the last decades, the availability of genetic data has exploded and genomic information is wide...
A GPU is used to datamine five million correlations between probes within Affymetrix HG-U133A probes...
The use of Bioinformatic tools in routine clinical diagnostics is still facing a number of issues. T...
M.Ing. (Electrical And Electronic Engineering)Bioinformatics is one of the most rapidly advancing sc...
Millions of short sequences are produced because of the introduction of next-generation sequencing t...