Development of SNP markers for Ayous (Triplochiton scleroxylon K. Schum) an economically important tree species from tropical West and Central Africa
- Jardine, D.
- Blanc-Jolivet, C.
- Dixon, R.
- Dormontt, E.
- Dunker, B.
- Gerlach, J.
- Kersten, B.
- van Dijk, K.
- Degen, B.
- Lowe, A.
Publication date
January 2016
DOI Publisher
Springer Science and Business Media LLC ISSN
1877-7252 Journal
Conservation Genetics Resources Citation count (estimate)
6Abstract
Published online: 30 March 2016182 SNP markers were developed for Ayous (Triplochiton scleroxylon K. Schum) by incorporating information from two next generation sequencing approaches (RADseq Floragenex and AFLPseq IonTorrent PGM) into a single genotyping panel for MassARRAY® iPLEX™. This set of markers was successfully used to genotype 753 individuals from 43 populations in five Tropical West and Central African Countries. These loci have an expected heterozygosity range of 0.007–0.501 and FST from 0 to 0.306.D. I. Jardine, C. Blanc-Jolivet, R. R. M. Dixon, E. E. Dormontt, B. Dunker, J. Gerlach, B. Kersten, K.-J. van Dijk, B. Degen, A. J. Low
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