Add to ORKGSeqWord Gene Island Sniffer, a new program for the identification of mobile genetic elements in sequences of bacterial chromosomes is presented. This program is based on the analysis of oligonucleotide usage variations in DNA sequences. 3,518 mobile genetic elements were identified in 637 bacterial genomes and further analyzed by sequence similarity and the functionality of encoded proteins. The results of this study are stored in an open database (http://anjie.bi.up.ac.za/geidb/geidbhome. php). The developed computer program and the database provide the information valuable for further investigation of the distribution of mobile genetic elements and virulence factors among bacteria. The program is available for download at www.bi.up.ac.za/...
Future studies of population structure and the evolution of bacterial species will require DNA seque...
Bacterial genomes vary extensively in terms of both gene content and gene sequence. This plasticity ...
BACKGROUND: Horizontal gene transfer contributes to bacterial evolution through mobilising genes acr...
SeqWord Gene Island Sniffer, a new program for the identification of mobile genetic elements in sequ...
Abstract Background Data mining in large DNA sequences is a major challenge in microbial genomics an...
Ely. The genomic regions covering the giant gene for the surface protein SwmB [] were highlighted by...
Ely. The genomic regions covering the giant gene for the surface protein SwmB [] were highlighted by...
AbstractMotivationHorizontally transferred genomic islands (islands, GIs) have been referred to as i...
High-throughput sequencing technologies have made it possible to study bacteria through analyzing th...
This work is about gene detection in DNA sequencies. It explains how the information in DNA is store...
Ws discrimination of divergent genomic regions. In this example a part of the chromosome of KT2440 (...
Ws discrimination of divergent genomic regions. In this example a part of the chromosome of KT2440 (...
Bioinformation analysis of the bacterial genome with screening of genetic elements to detect variabi...
Objectives - Antimicrobial resistance (AMR) in clinically relevant bacteria is a growing threat to p...
Various methods have been developed to detect horizontal gene transfer in bacteria, based on anoma-l...
Future studies of population structure and the evolution of bacterial species will require DNA seque...
Bacterial genomes vary extensively in terms of both gene content and gene sequence. This plasticity ...
BACKGROUND: Horizontal gene transfer contributes to bacterial evolution through mobilising genes acr...
SeqWord Gene Island Sniffer, a new program for the identification of mobile genetic elements in sequ...
Abstract Background Data mining in large DNA sequences is a major challenge in microbial genomics an...
Ely. The genomic regions covering the giant gene for the surface protein SwmB [] were highlighted by...
Ely. The genomic regions covering the giant gene for the surface protein SwmB [] were highlighted by...
AbstractMotivationHorizontally transferred genomic islands (islands, GIs) have been referred to as i...
High-throughput sequencing technologies have made it possible to study bacteria through analyzing th...
This work is about gene detection in DNA sequencies. It explains how the information in DNA is store...
Ws discrimination of divergent genomic regions. In this example a part of the chromosome of KT2440 (...
Ws discrimination of divergent genomic regions. In this example a part of the chromosome of KT2440 (...
Bioinformation analysis of the bacterial genome with screening of genetic elements to detect variabi...
Objectives - Antimicrobial resistance (AMR) in clinically relevant bacteria is a growing threat to p...
Various methods have been developed to detect horizontal gene transfer in bacteria, based on anoma-l...
Future studies of population structure and the evolution of bacterial species will require DNA seque...
Bacterial genomes vary extensively in terms of both gene content and gene sequence. This plasticity ...
BACKGROUND: Horizontal gene transfer contributes to bacterial evolution through mobilising genes acr...