Add to ORKGA 16S rRNA gene database (http://greengenes.lbl.gov) addresses limitations of public repositories by providing chimera-screening, standard alignments and taxonomic classification using multiple published taxonomies. It was revealed that incongruent taxonomic nomenclature exists among curators even at the phylum-level. Putative chimeras were identified in 3% of environmental sequences and 0.2% of records derived from isolates. Environmental sequences were classified into 100 phylum-level lineages within the Archaea and Bacteria
Publicly available sequence databases of the small subunit ribosomal RNA gene, also known as 16S rRN...
In ecological studies, microbial diversity is nowadays mostly assessed via the detection of phylogen...
Obtaining an accurate representation of the microorganisms present in microbial ecosystems presents ...
A 16S rRNA gene database (http://greengenes.bl.gov) addresses limitations of public repositories by ...
A 16S rRNA gene database (http://greengenes.lbl.gov) addresses limitations of public repositories by...
Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker g...
Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker g...
rRNA-genes for phylogenetic classifications started to be used in 1980s first time by Carl Woese whi...
A new method for detecting chimeras and other anomalies within 16S rRNA sequence records is presente...
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
Background: Microscopic, biochemical, molecular, and computer-based approaches are extensively used ...
International audienceThe interrogation of genetic markers in environmental meta-barcoding studies i...
To analyze complex biodiversity in microbial communities, 16S rRNA marker gene sequences are often a...
Publicly available sequence databases of the small subunit ribosomal RNA gene, also known as 16S rRN...
In ecological studies, microbial diversity is nowadays mostly assessed via the detection of phylogen...
Obtaining an accurate representation of the microorganisms present in microbial ecosystems presents ...
A 16S rRNA gene database (http://greengenes.bl.gov) addresses limitations of public repositories by ...
A 16S rRNA gene database (http://greengenes.lbl.gov) addresses limitations of public repositories by...
Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker g...
Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker g...
rRNA-genes for phylogenetic classifications started to be used in 1980s first time by Carl Woese whi...
A new method for detecting chimeras and other anomalies within 16S rRNA sequence records is presente...
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
Background: Microscopic, biochemical, molecular, and computer-based approaches are extensively used ...
International audienceThe interrogation of genetic markers in environmental meta-barcoding studies i...
To analyze complex biodiversity in microbial communities, 16S rRNA marker gene sequences are often a...
Publicly available sequence databases of the small subunit ribosomal RNA gene, also known as 16S rRN...
In ecological studies, microbial diversity is nowadays mostly assessed via the detection of phylogen...
Obtaining an accurate representation of the microorganisms present in microbial ecosystems presents ...