Mixed linear regression analysis assessing the effect of treatments (RNAlater, storage temperature, and time for room temperature exposure prior to freezing) and their interactions on the weighted UniFrac (beta diversity) of fecal microbiota of six healthy dogs.

Sample collection and processing methods.

Olivia Chiu (17867273)
Diego E. Gomez (5954507)
Dasiel Obrego (17867276)
Kari Dunfield (5883776)
Jennifer L. MacNicol (11517874)
Brooklynn Liversidge (17867279)
Adronie Verbrugghe (3485333)

January 2024

From each dog, the fecal sample was cut longitudinally in half (A). One half was divided into eight ...

Effect of an extruded animal protein-free diet on fecal microbiota of dogs with food-responsive enteropathy

Bresciani, Francesca
Minamoto, Yasushi
Suchodolski, Jan S.
Galiazzo, Giorgia
Vecchiato, Carla G.
Pinna, Carlo
Biagi, Giacomo
Pietra, Marco

January 2018

Background: Dietary interventions are thought to modify gut microbial communities in healthy individ...

Principal coordinates analysis (PCoA) of V4 16S rRNA genes from canine fecal samples.

Hirotaka Igarashi (630791)
Shingo Maeda (154269)
Koichi Ohno (630792)
Ayako Horigome (630793)
Toshitaka Odamaki (630794)
Hajime Tsujimoto (130685)

September 2014

Figures were calculated using unweighted UniFrac distances. (A) Result of dogs administered metro...

Mixed linear regression analysis assessing the effect of treatments (RNAlater, storage temperature, and time for room temperature exposure prior to freezing) and their interactions on the Shannon entropy index of fecal microbiota of six healthy dogs.

Olivia Chiu (17867273)
Diego E. Gomez (5954507)
Dasiel Obrego (17867276)
Kari Dunfield (5883776)
Jennifer L. MacNicol (11517874)
Brooklynn Liversidge (17867279)
Adronie Verbrugghe (3485333)

January 2024

Mixed linear regression analysis assessing the effect of treatments (RNAlater, storage temperature, ...

Effects of preservation method on canine (Canis lupus familiaris) fecal microbiota

Horng, Katti R
Ganz, Holly H
Eisen, Jonathan A
Marks, Stanley L

January 2018

Studies involving gut microbiome analysis play an increasing role in the evaluation of health and di...

Statistical analysis determining the influence of host genotype x temperature interaction on bacterial colonization in experimental animals.

Laura Baldassarre (11545597)
Adam M. Reitzel (7849394)
Sebastian Fraune (649054)

January 2023

Statistical analysis determining the influence of host genotype x temperature interaction on bacteri...

Longitudinal Survey of Fecal Microbiota in Healthy Dogs Administered a Commercial Probiotic

Ciaravolo, S
Martinez-Lopez, LM
Allcock, RJN
Woodward, AP
Mansfield, C

June 2021

The aim of this longitudinal microbiome study was to investigate the effects of a commercially avail...

Statistical analysis determining the influence of host genotype and temperature on bacterial colonization in experimental animals.

Laura Baldassarre (11545597)
Adam M. Reitzel (7849394)
Sebastian Fraune (649054)

January 2023

Statistical analysis determining the influence of host genotype and temperature on bacterial coloniz...

Fecal microbiome and predicted gene function in Czechoslovakian Wolfdogs fed with either a bone and raw food diet or a commercial diet

Cerquetella, Matteo
Silvi, Stefania
Verdenelli, Maria Cristina
Coman, Maria Magdalena
Spaterna, Andrea
Steiner, Jörg M.
Rossi, Giacomo
Suchodolski, Jan

January 2017

The mammalian intestine is inhabited by a set of microorganisms (i.e., bacteria, viruses, fungi, ar...

Bacterial diversity measures.

Milena Schmidt (5634908)
Stefan Unterer (107353)
Jan S. Suchodolski (107343)
Julia B. Honneffer (5634911)
Blake C. Guard (743494)
Jonathan A. Lidbury (5634914)
Jörg M. Steiner (107366)
Julia Fritz (3313950)
Petra Kölle (5634917)

August 2018

(a) Alpha diversity: Rarefaction analysis of 16S rRNA gene sequences in raw and commercially fed dog...

qPCR and MAT results, estimated bacterial load, major laboratorial and clinical findings and registry data from all dogs exhibiting urinary shedding of leptospires.

Bruno Alonso Miotto (5504666)
Aline Gil Alves Guilloux (5504669)
Barbara Furlan Tozzi (5504678)
Luisa Zanolli Moreno (5504672)
Aline Santana da Hora (5504675)
Ricardo Augusto Dias (702923)
Marcos Bryan Heinemann (771278)
Andrea Micke Moreno (4097251)
Antônio Francisco de Souza Filho (5504681)
Walter Lilenbaum (4680391)
Mitika Kuribayashi Hagiwara (5504684)

July 2018

qPCR and MAT results, estimated bacterial load, major laboratorial and clinical findings and regi...

Results of univariable analysis (Univariable Linear Model) of the microbiome observed index and Shannon index (alpha diversity) at admission (t0) and at release (R) of pups.

Ana Rubio-Garcia (11180249)
Aldert L. Zomer (8804411)
Ruoshui Guo (17583332)
John W. A. Rossen (7343453)
Jan H. van Zeijl (17583335)
Jaap A. Wagenaar (6680333)
Roosmarijn E. C. Luiken (15258026)

December 2023

Results of univariable analysis (Univariable Linear Model) of the microbiome observed index and Shan...

Machine Learning and Canine Chronic Enteropathies: A New Approach to Investigate FMT Effects

Giada Innocente
Ilaria Patuzzi
Tommaso Furlanello
Barbara Di Camillo
Luca Bargelloni
Maria Cecilia Giron
Sonia Facchin
Edoardo Savarino
Mirko Azzolin
Barbara Simionati

September 2022

Fecal microbiota transplantation (FMT) represents a very promising approach to decreasing disease ac...

Statistical analysis determining the influence of animal laboratory maintenance on bacterial colonization.

Laura Baldassarre (11545597)
Adam M. Reitzel (7849394)
Sebastian Fraune (649054)

January 2023

Statistical analysis determining the influence of animal laboratory maintenance on bacterial coloniz...

Results of univariable analysis (PERMANOVA) of the microbiome composition (beta diversity) at admission (t0) and at release (R) of pups.

Ana Rubio-Garcia (11180249)
Aldert L. Zomer (8804411)
Ruoshui Guo (17583332)
John W. A. Rossen (7343453)
Jan H. van Zeijl (17583335)
Jaap A. Wagenaar (6680333)
Roosmarijn E. C. Luiken (15258026)

December 2023

Results of univariable analysis (PERMANOVA) of the microbiome composition (beta diversity) at admiss...

Sample collection and processing methods.

Olivia Chiu (17867273)
Diego E. Gomez (5954507)
Dasiel Obrego (17867276)
Kari Dunfield (5883776)
Jennifer L. MacNicol (11517874)
Brooklynn Liversidge (17867279)
Adronie Verbrugghe (3485333)

January 2024

From each dog, the fecal sample was cut longitudinally in half (A). One half was divided into eight ...

Effect of an extruded animal protein-free diet on fecal microbiota of dogs with food-responsive enteropathy

Bresciani, Francesca
Minamoto, Yasushi
Suchodolski, Jan S.
Galiazzo, Giorgia
Vecchiato, Carla G.
Pinna, Carlo
Biagi, Giacomo
Pietra, Marco

January 2018

Background: Dietary interventions are thought to modify gut microbial communities in healthy individ...

Principal coordinates analysis (PCoA) of V4 16S rRNA genes from canine fecal samples.

Hirotaka Igarashi (630791)
Shingo Maeda (154269)
Koichi Ohno (630792)
Ayako Horigome (630793)
Toshitaka Odamaki (630794)
Hajime Tsujimoto (130685)

September 2014

Figures were calculated using unweighted UniFrac distances. (A) Result of dogs administered metro...

Mixed linear regression analysis assessing the effect of treatments (RNAlater, storage temperature, and time for room temperature exposure prior to freezing) and their interactions on the Shannon entropy index of fecal microbiota of six healthy dogs.

Olivia Chiu (17867273)
Diego E. Gomez (5954507)
Dasiel Obrego (17867276)
Kari Dunfield (5883776)
Jennifer L. MacNicol (11517874)
Brooklynn Liversidge (17867279)
Adronie Verbrugghe (3485333)

January 2024

Mixed linear regression analysis assessing the effect of treatments (RNAlater, storage temperature, ...

Effects of preservation method on canine (Canis lupus familiaris) fecal microbiota

Horng, Katti R
Ganz, Holly H
Eisen, Jonathan A
Marks, Stanley L

January 2018

Studies involving gut microbiome analysis play an increasing role in the evaluation of health and di...

Statistical analysis determining the influence of host genotype x temperature interaction on bacterial colonization in experimental animals.

Laura Baldassarre (11545597)
Adam M. Reitzel (7849394)
Sebastian Fraune (649054)

January 2023

Statistical analysis determining the influence of host genotype x temperature interaction on bacteri...

Longitudinal Survey of Fecal Microbiota in Healthy Dogs Administered a Commercial Probiotic

Ciaravolo, S
Martinez-Lopez, LM
Allcock, RJN
Woodward, AP
Mansfield, C

June 2021

The aim of this longitudinal microbiome study was to investigate the effects of a commercially avail...

Statistical analysis determining the influence of host genotype and temperature on bacterial colonization in experimental animals.

Laura Baldassarre (11545597)
Adam M. Reitzel (7849394)
Sebastian Fraune (649054)

January 2023

Statistical analysis determining the influence of host genotype and temperature on bacterial coloniz...

Fecal microbiome and predicted gene function in Czechoslovakian Wolfdogs fed with either a bone and raw food diet or a commercial diet

Cerquetella, Matteo
Silvi, Stefania
Verdenelli, Maria Cristina
Coman, Maria Magdalena
Spaterna, Andrea
Steiner, Jörg M.
Rossi, Giacomo
Suchodolski, Jan

January 2017

The mammalian intestine is inhabited by a set of microorganisms (i.e., bacteria, viruses, fungi, ar...

Bacterial diversity measures.

Milena Schmidt (5634908)
Stefan Unterer (107353)
Jan S. Suchodolski (107343)
Julia B. Honneffer (5634911)
Blake C. Guard (743494)
Jonathan A. Lidbury (5634914)
Jörg M. Steiner (107366)
Julia Fritz (3313950)
Petra Kölle (5634917)

August 2018

(a) Alpha diversity: Rarefaction analysis of 16S rRNA gene sequences in raw and commercially fed dog...

qPCR and MAT results, estimated bacterial load, major laboratorial and clinical findings and registry data from all dogs exhibiting urinary shedding of leptospires.

Bruno Alonso Miotto (5504666)
Aline Gil Alves Guilloux (5504669)
Barbara Furlan Tozzi (5504678)
Luisa Zanolli Moreno (5504672)
Aline Santana da Hora (5504675)
Ricardo Augusto Dias (702923)
Marcos Bryan Heinemann (771278)
Andrea Micke Moreno (4097251)
Antônio Francisco de Souza Filho (5504681)
Walter Lilenbaum (4680391)
Mitika Kuribayashi Hagiwara (5504684)

July 2018

qPCR and MAT results, estimated bacterial load, major laboratorial and clinical findings and regi...

Results of univariable analysis (Univariable Linear Model) of the microbiome observed index and Shannon index (alpha diversity) at admission (t0) and at release (R) of pups.

Ana Rubio-Garcia (11180249)
Aldert L. Zomer (8804411)
Ruoshui Guo (17583332)
John W. A. Rossen (7343453)
Jan H. van Zeijl (17583335)
Jaap A. Wagenaar (6680333)
Roosmarijn E. C. Luiken (15258026)

December 2023

Results of univariable analysis (Univariable Linear Model) of the microbiome observed index and Shan...

Machine Learning and Canine Chronic Enteropathies: A New Approach to Investigate FMT Effects

Giada Innocente
Ilaria Patuzzi
Tommaso Furlanello
Barbara Di Camillo
Luca Bargelloni
Maria Cecilia Giron
Sonia Facchin
Edoardo Savarino
Mirko Azzolin
Barbara Simionati

September 2022

Fecal microbiota transplantation (FMT) represents a very promising approach to decreasing disease ac...

Statistical analysis determining the influence of animal laboratory maintenance on bacterial colonization.

Laura Baldassarre (11545597)
Adam M. Reitzel (7849394)
Sebastian Fraune (649054)

January 2023

Statistical analysis determining the influence of animal laboratory maintenance on bacterial coloniz...

Results of univariable analysis (PERMANOVA) of the microbiome composition (beta diversity) at admission (t0) and at release (R) of pups.

Ana Rubio-Garcia (11180249)
Aldert L. Zomer (8804411)
Ruoshui Guo (17583332)
John W. A. Rossen (7343453)
Jan H. van Zeijl (17583335)
Jaap A. Wagenaar (6680333)
Roosmarijn E. C. Luiken (15258026)

December 2023

Results of univariable analysis (PERMANOVA) of the microbiome composition (beta diversity) at admiss...

Sample collection and processing methods.

Olivia Chiu (17867273)
Diego E. Gomez (5954507)
Dasiel Obrego (17867276)
Kari Dunfield (5883776)
Jennifer L. MacNicol (11517874)
Brooklynn Liversidge (17867279)
Adronie Verbrugghe (3485333)

January 2024

From each dog, the fecal sample was cut longitudinally in half (A). One half was divided into eight ...

Effect of an extruded animal protein-free diet on fecal microbiota of dogs with food-responsive enteropathy

Bresciani, Francesca
Minamoto, Yasushi
Suchodolski, Jan S.
Galiazzo, Giorgia
Vecchiato, Carla G.
Pinna, Carlo
Biagi, Giacomo
Pietra, Marco

January 2018

Background: Dietary interventions are thought to modify gut microbial communities in healthy individ...

Principal coordinates analysis (PCoA) of V4 16S rRNA genes from canine fecal samples.

Hirotaka Igarashi (630791)
Shingo Maeda (154269)
Koichi Ohno (630792)
Ayako Horigome (630793)
Toshitaka Odamaki (630794)
Hajime Tsujimoto (130685)

September 2014

Figures were calculated using unweighted UniFrac distances. (A) Result of dogs administered metro...

Mixed linear regression analysis assessing the effect of treatments (RNA<i>later</i>, storage temperature, and time for room temperature exposure prior to freezing) and their interactions on the weighted UniFrac (beta diversity) of fecal microbiota of six healthy dogs.

Abstract

Extracted data

Mixed linear regression analysis assessing the effect of treatments (RNA<i>later</i>, storage temperature, and time for room temperature exposure prior to freezing) and their interactions on the weighted UniFrac (beta diversity) of fecal microbiota of six healthy dogs.

Abstract

Extracted data

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