CSV file containing the phylogenetic reconstruction accuracy (Quartet and RF) and timing information for CONET simulated data for Lazac, Lazac-NJ, Sitka, WCND, MEDICC2, Hamming-NJ, and Rectilinear-NJ across all simulation parameters. (CSV)</p
Phylogenetic trees inferred from the ddRAD data matrices built with different parameters of clusteri...
Parameters for the various continuity scenarios simulated in Europe. (DOCX 18 kb
Estimated times of the most recent common ancestors (tMRCAs) of the main clades and 95% credibility ...
Table S1: Columns show species used for demographic reconstruction, citations for original studies, ...
CSV file containing statistics on the number of children at each node in the inferred Lazac and Sitk...
CSV file containing the exact versus relaxed ZCNT small parsimony scores when the balancing and inte...
CSV file containing a single column - these are the trees sampled from the posterior distribution wh...
This zip file contains data related to the diversification analyses. This includes the cytochrome c ...
Simulated data files, and the results of phylogenetic estimation from these data
Bootstrap support for the clusters identified (see Additional file 3: Figure S1 and Additional file ...
Baseline reconstruction accuracy on (left: RF distance; right: Quartet distance) CONET simulated dat...
This dataset comprises the following files: - A tarball containing all alignments per run, used to ...
<p>The phylogenetic tree, for the ten HCV genotype 1 sequences from HCV core region, was constructed...
Compressed files for the simulation pipeline generates coalescent-based genealogies that comprise a ...
<p>Bootstrap support values (1000 replicates) for nodes higher than 50% are indicated next to the co...
Phylogenetic trees inferred from the ddRAD data matrices built with different parameters of clusteri...
Parameters for the various continuity scenarios simulated in Europe. (DOCX 18 kb
Estimated times of the most recent common ancestors (tMRCAs) of the main clades and 95% credibility ...
Table S1: Columns show species used for demographic reconstruction, citations for original studies, ...
CSV file containing statistics on the number of children at each node in the inferred Lazac and Sitk...
CSV file containing the exact versus relaxed ZCNT small parsimony scores when the balancing and inte...
CSV file containing a single column - these are the trees sampled from the posterior distribution wh...
This zip file contains data related to the diversification analyses. This includes the cytochrome c ...
Simulated data files, and the results of phylogenetic estimation from these data
Bootstrap support for the clusters identified (see Additional file 3: Figure S1 and Additional file ...
Baseline reconstruction accuracy on (left: RF distance; right: Quartet distance) CONET simulated dat...
This dataset comprises the following files: - A tarball containing all alignments per run, used to ...
<p>The phylogenetic tree, for the ten HCV genotype 1 sequences from HCV core region, was constructed...
Compressed files for the simulation pipeline generates coalescent-based genealogies that comprise a ...
<p>Bootstrap support values (1000 replicates) for nodes higher than 50% are indicated next to the co...
Phylogenetic trees inferred from the ddRAD data matrices built with different parameters of clusteri...
Parameters for the various continuity scenarios simulated in Europe. (DOCX 18 kb
Estimated times of the most recent common ancestors (tMRCAs) of the main clades and 95% credibility ...
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