NOD drug DMRs.

NOD diet DEGs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + vehicle vs. standard diet ...

Gene-by-diet interactions in hepatic DNA methylation of BL6, A/J, and NOD mice.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

(A) Heatmap of mean methylation differences between diets across a 3-kb window centered around the 1...

Dietary restriction-related methylation changes are conserved across mouse strains.

Oliver Hahn (745049)
Thomas M. Stubbs (5999909)
Wolf Reik (93503)
Sebastian Grönke (28678)
Andreas Beyer (58396)
Linda Partridge (9382)

December 2018

(A) Schematic representation of the data sets analysed and comparisons made. We probed for Dietary R...

NOD diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between NOD mice on the American vs. standard diet. (XLSX)</p

NOD diet DMRs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between NOD mice given the American diet + vehicle vs. standard di...

BL6 drug DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between BL6 mice given the American diet + GW4064 vs. American die...

NOD drug DEGs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + GW4064 vs. American diet +...

A/J diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between A/J mice on the American vs. standard diet. (XLSX)</p

BL6 diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between BL6 mice on the American vs. standard diet. (XLSX)</p

NOD overlapping diet DEGs and diet DMR-associated genes.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Overlap of differentially expressed genes between NOD mice on the American vs. standard diet with di...

BL6 diet DMRs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between BL6 mice given the American diet + vehicle vs. standard di...

Pathway enrichments of NOD diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

IPA results showing enriched pathways among differentially methylated region-associated genes betwee...

NOD overlapping diet and drug DEGs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + vehicle vs. standard diet ...

NOD diet DEGs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice on the American vs. standard diet. (XLSX)</p

NOD drug nominal DEGs within the <i>Nr1h4</i> master regulatory network.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Nominally differentially expressed genes within the FXR (Nr1h4) master regulatory network between NO...

NOD diet DEGs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + vehicle vs. standard diet ...

Gene-by-diet interactions in hepatic DNA methylation of BL6, A/J, and NOD mice.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

(A) Heatmap of mean methylation differences between diets across a 3-kb window centered around the 1...

Dietary restriction-related methylation changes are conserved across mouse strains.

Oliver Hahn (745049)
Thomas M. Stubbs (5999909)
Wolf Reik (93503)
Sebastian Grönke (28678)
Andreas Beyer (58396)
Linda Partridge (9382)

December 2018

(A) Schematic representation of the data sets analysed and comparisons made. We probed for Dietary R...

NOD diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between NOD mice on the American vs. standard diet. (XLSX)</p

NOD diet DMRs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between NOD mice given the American diet + vehicle vs. standard di...

BL6 drug DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between BL6 mice given the American diet + GW4064 vs. American die...

NOD drug DEGs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + GW4064 vs. American diet +...

A/J diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between A/J mice on the American vs. standard diet. (XLSX)</p

BL6 diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between BL6 mice on the American vs. standard diet. (XLSX)</p

NOD overlapping diet DEGs and diet DMR-associated genes.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Overlap of differentially expressed genes between NOD mice on the American vs. standard diet with di...

BL6 diet DMRs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially methylated regions between BL6 mice given the American diet + vehicle vs. standard di...

Pathway enrichments of NOD diet DMRs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

IPA results showing enriched pathways among differentially methylated region-associated genes betwee...

NOD overlapping diet and drug DEGs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + vehicle vs. standard diet ...

NOD diet DEGs.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice on the American vs. standard diet. (XLSX)</p

NOD drug nominal DEGs within the <i>Nr1h4</i> master regulatory network.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Nominally differentially expressed genes within the FXR (Nr1h4) master regulatory network between NO...

NOD diet DEGs with vehicle.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

Differentially expressed genes between NOD mice given the American diet + vehicle vs. standard diet ...

Gene-by-diet interactions in hepatic DNA methylation of BL6, A/J, and NOD mice.

Phillip Wulfridge (17271441)
Adam Davidovich (17271444)
Anna C. Salvador (11768039)
Gabrielle C. Manno (17271447)
Rakel Tryggvadottir (3505421)
Adrian Idrizi (8508693)
M. Nazmul Huda (5439995)
Brian J. Bennett (10128839)
L. Garry Adams (10802944)
Kasper D. Hansen (3107598)
David W. Threadgill (8724228)
Andrew P. Feinberg (171575)

October 2023

(A) Heatmap of mean methylation differences between diets across a 3-kb window centered around the 1...

Dietary restriction-related methylation changes are conserved across mouse strains.

Oliver Hahn (745049)
Thomas M. Stubbs (5999909)
Wolf Reik (93503)
Sebastian Grönke (28678)
Andreas Beyer (58396)
Linda Partridge (9382)

December 2018

(A) Schematic representation of the data sets analysed and comparisons made. We probed for Dietary R...

Abstract

Extracted data

NOD drug DMRs.

Abstract

Extracted data

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