An efficient method to compute the thermal rate constant for rare events within the correlation function C(t) approach is presented. This method, which is based on a modification of the sampling function used to evaluate the dynamical correlation function C(t), can be applied to high-dimensional systems having a rough energy landscape without previous knowledge on the transition states location. In this work, the sampling of a Boltzmann-like distribution for the linear momenta with a lower inverse temperature (β* = 1/kT*) than the correct one (β = 1/kT) is proposed as a way to increase the number of reactive trajectories. The mismatch between the β* and β distributions is then corrected by a reweighting procedure which allows one to obtain ...
We introduce a method to evaluate simultaneously the reaction rate constant and the free energy prof...
AbstractAn enhanced sampling method—biased Brownian dynamics—is developed for the calculation of dif...
A central object in the computational studies of rare events is the committor function. Though costl...
An efficient method to compute the thermal rate constant for rare events within the correlation func...
We present an algorithm for finding the probabilities of rare events in nonequilibrium processes. Th...
Open Access.We present an algorithm for finding the probabilities of rare events in nonequilibrium p...
We review two recently developed efficient methods for calculating rate constants of processes domin...
Building on the work of Iftimie et al., Boltzmann sampling of an approximate potential (the 'referen...
International audiencetransition path sampling is a method for estimating the rates of rare events i...
International audienceWe show that the importance sampling technique can effectively augment the ran...
The efficient calculation of rare-event kinetics in complex dynamical systems, such as the rate and ...
A method for sampling efficiently the free energy landscape of a complex system with respect to some...
The authors present a new molecular dynamics algorithm for sampling the canonical distribution. In t...
AbstractA reaction probability is required to calculate the rate constant of a diffusion-dominated r...
We present a technique to resolve the rare event problem for a Langevin equation describing a system...
We introduce a method to evaluate simultaneously the reaction rate constant and the free energy prof...
AbstractAn enhanced sampling method—biased Brownian dynamics—is developed for the calculation of dif...
A central object in the computational studies of rare events is the committor function. Though costl...
An efficient method to compute the thermal rate constant for rare events within the correlation func...
We present an algorithm for finding the probabilities of rare events in nonequilibrium processes. Th...
Open Access.We present an algorithm for finding the probabilities of rare events in nonequilibrium p...
We review two recently developed efficient methods for calculating rate constants of processes domin...
Building on the work of Iftimie et al., Boltzmann sampling of an approximate potential (the 'referen...
International audiencetransition path sampling is a method for estimating the rates of rare events i...
International audienceWe show that the importance sampling technique can effectively augment the ran...
The efficient calculation of rare-event kinetics in complex dynamical systems, such as the rate and ...
A method for sampling efficiently the free energy landscape of a complex system with respect to some...
The authors present a new molecular dynamics algorithm for sampling the canonical distribution. In t...
AbstractA reaction probability is required to calculate the rate constant of a diffusion-dominated r...
We present a technique to resolve the rare event problem for a Langevin equation describing a system...
We introduce a method to evaluate simultaneously the reaction rate constant and the free energy prof...
AbstractAn enhanced sampling method—biased Brownian dynamics—is developed for the calculation of dif...
A central object in the computational studies of rare events is the committor function. Though costl...