Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Additional file 1: Table S1. of Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages

Shuang Yin (2049994)
Brigida Rusconi (3551264)
Fatemeh Sanjar (3551270)
Kakolie Goswami (3551267)
Lingzi Xiaoli (3551273)
Mark Eppinger (78034)
Edward Dudley (378637)

September 2015

Information on Escherichia coli O157:H7 strains used in this study, and Genbank accession numbers fo...

Additional file 1: Table S1. of In vitro antibacterial and antibiotic-potentiation activities of the methanol extracts from Beilschmiedia acuta, Clausena anisata, Newbouldia laevis and Polyscias fulva against multidrug-resistant Gram-negative bacteria

Simplice Tankeo (3412709)
Pierre Tane (345896)
Victor Kuete (345889)

November 2015

MICs up to 1024 μg/mL of the crude extracts and ciprofloxacin on the panel of tested bacteria. Table...

Additional file 6: of Comparative genomics reveals structural and functional features specific to the genome of a foodborne Escherichia coli O157:H7

Vijay Sharma (651200)
Suryatej Akavaram (6441005)
Robert Schaut (6441008)
Darrell Bayles (3468284)

March 2019

Table S1. Bacterial strains with their corresponding accession numbers used in the study. (DOCX 29 k...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics
Tianjin University

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics
Tianjin University

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics
Tianjin University

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 2: of Insights into the draft genome sequence of bioactives-producing Bacillus thuringiensis DNG9 isolated from Algerian soil-oil slough

Mohamed Daas (5852339)
Albert Rosana (5803577)
Jeella Acedo (5852342)
Malika Douzane (5852345)
Farida Nateche (5852348)
Salima Kebbouche-Gana (425065)
John Vederas (5852351)

October 2018

Table S1. Average nucleotide identity (ANI) and digital DNA:DNA Hybridization (dDDH) between the gen...

Additional file 2: Table S2. of Whole genome shotgun sequence of Bacillus amyloliquefaciens TF28, a biocontrol entophytic bacterium

Shumei Zhang (1633060)
Wei Jiang (14986)
Jing Li (10611)
Liqiang Meng (3571676)
Xu Cao (104337)
Jihua Hu (3571679)
Yushuai Liu (3571682)
Jingyu Chen (3571688)
Changqing Sha (3571685)

September 2016

Gene clusters of secondary metabolites synthesis in B.amyloliquefaciens TF28 and B.amyloliquefaciens...

Additional file 1: of Identification of new signalling peptides through a genome-wide survey of 250 fungal secretomes

Morgane Le Marquer (6244946)
HĂŠlĂ¨ne San Clemente (6244988)
Christophe Roux (17822)
Bruno Savelli (636402)
Nicolas Frei dit Frey (6244955)

January 2019

Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb

Additional file 1: of Encyclopedia of bacterial gene circuits whose presence or absence correlate with pathogenicity – a large-scale system analysis of decoded bacterial genomes

Maksim Shestov (3437702)
Santiago Ontañón (3437705)
Aydin Tozeren (84457)

October 2015

List of 949 decoded bacterial genomes present in the KEGG web platform deemed as pathogenic along wi...

Additional file 3: of Insights into the draft genome sequence of bioactives-producing Bacillus thuringiensis DNG9 isolated from Algerian soil-oil slough

Mohamed Daas (5852339)
Albert Rosana (5803577)
Jeella Acedo (5852342)
Malika Douzane (5852345)
Farida Nateche (5852348)
Salima Kebbouche-Gana (425065)
John Vederas (5852351)

October 2018

Table S2. Gene inventory of 5 genomic islands in Bacillus thuringiensis DNG9 AND seven closely relat...

Additional file 3: of Antimicrobial potentiality of actinobacteria isolated from two microbiologically unexplored forest ecosystems of Northeast India

Ranjita Das (2098639)
Wahengbam Romi (5506511)
Rictika Das (5506505)
Hridip Sharma (5506508)
Debajit Thakur (3383126)

July 2018

Table S2. âMolecular identification of the 24 selected antimicrobial actinobacterial isolates base...

Additional file 1: Table S1. of Complete genome sequence of the molybdenum-resistant bacterium Bacillus subtilis strain LM 4â2

Xiao-Yan You (3534731)
Hui Wang (30400)
Guang-Yue Ren (3534725)
Jing-Jing Li (216056)
Xu Duan (3534722)
Hua-Jun Zheng (176350)
Zheng-Qiang Jiang (3534728)

December 2015

The results of ANI, AAI and GGDH value between genomes of strain LM 4-2 and other 30 complete sequen...

Additional file 1: of Bacillus safensis FO-36b and Bacillus pumilus SAFR-032: a whole genome comparison of two spacecraft assembly facility isolates

Madhan Tirumalai (39791)
Victor Stepanov (3407987)
Andrea WĂźnsche (5354492)
Saied Montazari (3162378)
Racquel Gonzalez (5354489)
Kasturi Venkateswaran (5354486)
George Fox (3407993)

June 2018

Table S1. In silico DNA-DNA hybridization (DDH) values showing Genome-genome distance [50] relations...

Additional file 1: Table S1. of Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages

Shuang Yin (2049994)
Brigida Rusconi (3551264)
Fatemeh Sanjar (3551270)
Kakolie Goswami (3551267)
Lingzi Xiaoli (3551273)
Mark Eppinger (78034)
Edward Dudley (378637)

September 2015

Information on Escherichia coli O157:H7 strains used in this study, and Genbank accession numbers fo...

Additional file 1: Table S1. of In vitro antibacterial and antibiotic-potentiation activities of the methanol extracts from Beilschmiedia acuta, Clausena anisata, Newbouldia laevis and Polyscias fulva against multidrug-resistant Gram-negative bacteria

Simplice Tankeo (3412709)
Pierre Tane (345896)
Victor Kuete (345889)

November 2015

MICs up to 1024 μg/mL of the crude extracts and ciprofloxacin on the panel of tested bacteria. Table...

Additional file 6: of Comparative genomics reveals structural and functional features specific to the genome of a foodborne Escherichia coli O157:H7

Vijay Sharma (651200)
Suryatej Akavaram (6441005)
Robert Schaut (6441008)
Darrell Bayles (3468284)

March 2019

Table S1. Bacterial strains with their corresponding accession numbers used in the study. (DOCX 29 k...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics
Tianjin University

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics
Tianjin University

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Zhao, Xin
Kuipers, Oscar P.
Molecular Genetics
Tianjin University

November 2016

Accession numbers of whole genome sequences (reported in Genbank) of Bacillales analyzed in this stu...

Additional file 2: of Insights into the draft genome sequence of bioactives-producing Bacillus thuringiensis DNG9 isolated from Algerian soil-oil slough

Mohamed Daas (5852339)
Albert Rosana (5803577)
Jeella Acedo (5852342)
Malika Douzane (5852345)
Farida Nateche (5852348)
Salima Kebbouche-Gana (425065)
John Vederas (5852351)

October 2018

Table S1. Average nucleotide identity (ANI) and digital DNA:DNA Hybridization (dDDH) between the gen...

Additional file 2: Table S2. of Whole genome shotgun sequence of Bacillus amyloliquefaciens TF28, a biocontrol entophytic bacterium

Shumei Zhang (1633060)
Wei Jiang (14986)
Jing Li (10611)
Liqiang Meng (3571676)
Xu Cao (104337)
Jihua Hu (3571679)
Yushuai Liu (3571682)
Jingyu Chen (3571688)
Changqing Sha (3571685)

September 2016

Gene clusters of secondary metabolites synthesis in B.amyloliquefaciens TF28 and B.amyloliquefaciens...

Additional file 1: of Identification of new signalling peptides through a genome-wide survey of 250 fungal secretomes

Morgane Le Marquer (6244946)
HĂŠlĂ¨ne San Clemente (6244988)
Christophe Roux (17822)
Bruno Savelli (636402)
Nicolas Frei dit Frey (6244955)

January 2019

Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb

Additional file 1: of Encyclopedia of bacterial gene circuits whose presence or absence correlate with pathogenicity – a large-scale system analysis of decoded bacterial genomes

Maksim Shestov (3437702)
Santiago Ontañón (3437705)
Aydin Tozeren (84457)

October 2015

List of 949 decoded bacterial genomes present in the KEGG web platform deemed as pathogenic along wi...

Additional file 3: of Insights into the draft genome sequence of bioactives-producing Bacillus thuringiensis DNG9 isolated from Algerian soil-oil slough

Mohamed Daas (5852339)
Albert Rosana (5803577)
Jeella Acedo (5852342)
Malika Douzane (5852345)
Farida Nateche (5852348)
Salima Kebbouche-Gana (425065)
John Vederas (5852351)

October 2018

Table S2. Gene inventory of 5 genomic islands in Bacillus thuringiensis DNG9 AND seven closely relat...

Additional file 3: of Antimicrobial potentiality of actinobacteria isolated from two microbiologically unexplored forest ecosystems of Northeast India

Ranjita Das (2098639)
Wahengbam Romi (5506511)
Rictika Das (5506505)
Hridip Sharma (5506508)
Debajit Thakur (3383126)

July 2018

Table S2. âMolecular identification of the 24 selected antimicrobial actinobacterial isolates base...

Additional file 1: Table S1. of Complete genome sequence of the molybdenum-resistant bacterium Bacillus subtilis strain LM 4â2

Xiao-Yan You (3534731)
Hui Wang (30400)
Guang-Yue Ren (3534725)
Jing-Jing Li (216056)
Xu Duan (3534722)
Hua-Jun Zheng (176350)
Zheng-Qiang Jiang (3534728)

December 2015

The results of ANI, AAI and GGDH value between genomes of strain LM 4-2 and other 30 complete sequen...

Additional file 1: of Bacillus safensis FO-36b and Bacillus pumilus SAFR-032: a whole genome comparison of two spacecraft assembly facility isolates

Madhan Tirumalai (39791)
Victor Stepanov (3407987)
Andrea WĂźnsche (5354492)
Saied Montazari (3162378)
Racquel Gonzalez (5354489)
Kasturi Venkateswaran (5354486)
George Fox (3407993)

June 2018

Table S1. In silico DNA-DNA hybridization (DDH) values showing Genome-genome distance [50] relations...

Additional file 1: Table S1. of Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages

Shuang Yin (2049994)
Brigida Rusconi (3551264)
Fatemeh Sanjar (3551270)
Kakolie Goswami (3551267)
Lingzi Xiaoli (3551273)
Mark Eppinger (78034)
Edward Dudley (378637)

September 2015

Information on Escherichia coli O157:H7 strains used in this study, and Genbank accession numbers fo...

Additional file 1: Table S1. of In vitro antibacterial and antibiotic-potentiation activities of the methanol extracts from Beilschmiedia acuta, Clausena anisata, Newbouldia laevis and Polyscias fulva against multidrug-resistant Gram-negative bacteria

Simplice Tankeo (3412709)
Pierre Tane (345896)
Victor Kuete (345889)

November 2015

MICs up to 1024 μg/mL of the crude extracts and ciprofloxacin on the panel of tested bacteria. Table...

Additional file 6: of Comparative genomics reveals structural and functional features specific to the genome of a foodborne Escherichia coli O157:H7

Vijay Sharma (651200)
Suryatej Akavaram (6441005)
Robert Schaut (6441008)
Darrell Bayles (3468284)

March 2019

Table S1. Bacterial strains with their corresponding accession numbers used in the study. (DOCX 29 k...

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Abstract

Extracted data

Additional file 1: Table S1. of Identification and classification of known and putative antimicrobial compounds produced by a wide variety of Bacillales species

Abstract

Extracted data

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