Hybrid quantum mechanics/molecular mechanics (QM/MM) simulations have become a popular tool for investigating chemical reactions in condensed phases. In QM/MM methods, the region of the system in which the chemical process takes place is treated at an appropriate level of quantum chemistry theory, while the remainder is described by a molecular mechanics force field. Within this approach, chemical reactivity can be studied in large systems, such as enzymes. Using quality management to calculate the properties of a large chemical library is time-consuming and costly. High-precision QM/MM calculation is a multi-scale calculation method to study ligand binding. By using quantum chemistry representing ligands combined with molecular mechanics t...
The use of computational quantum chemical methods to aid drug discovery is surveyed. An overview of ...
In this thesis, a simplified Quantum Mechanics/Molecular Mechanics (QM/MM) method has been developed...
In this thesis, we present novel computational methods and frameworks to address the challenges asso...
The QM/MM method, short for quantum mechanical/molecular mechanical, is a highly versatile approach ...
In this chapter, I discuss combined quantum mechanics (QM) and molecular mechanics (MM; QM/MM) calcu...
The QM/MM method, which couples a quantum mechanical (QM) description of bonding in a localized regi...
Determining the free energies and mechanisms of chemical reactions in solution and enzymes is a majo...
Over the past decade there has been a big interest in modeling and simulating large complex systems ...
Thirty years after the seminal contribution by Warshel and Levitt, we review the state of the art of...
Abstract Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answe...
Part of the BioExcel Virtual Workshop on Best Practices in QM/MM Simulation of Biomolecular Systems ...
Since in most cases biological macromolecular systems including solvent water molecules are remarkab...
Background Recent years have seen enormous progress in the development of methods for modeling (bio)...
This work explores the level of transparency in reporting the details of computational protocols tha...
Nature has developed large groups of enzymatic catalysts with the aim to transfer substrates into us...
The use of computational quantum chemical methods to aid drug discovery is surveyed. An overview of ...
In this thesis, a simplified Quantum Mechanics/Molecular Mechanics (QM/MM) method has been developed...
In this thesis, we present novel computational methods and frameworks to address the challenges asso...
The QM/MM method, short for quantum mechanical/molecular mechanical, is a highly versatile approach ...
In this chapter, I discuss combined quantum mechanics (QM) and molecular mechanics (MM; QM/MM) calcu...
The QM/MM method, which couples a quantum mechanical (QM) description of bonding in a localized regi...
Determining the free energies and mechanisms of chemical reactions in solution and enzymes is a majo...
Over the past decade there has been a big interest in modeling and simulating large complex systems ...
Thirty years after the seminal contribution by Warshel and Levitt, we review the state of the art of...
Abstract Combined quantum mechanics/molecular mechanics (QM/MM) modelling has the potential to answe...
Part of the BioExcel Virtual Workshop on Best Practices in QM/MM Simulation of Biomolecular Systems ...
Since in most cases biological macromolecular systems including solvent water molecules are remarkab...
Background Recent years have seen enormous progress in the development of methods for modeling (bio)...
This work explores the level of transparency in reporting the details of computational protocols tha...
Nature has developed large groups of enzymatic catalysts with the aim to transfer substrates into us...
The use of computational quantum chemical methods to aid drug discovery is surveyed. An overview of ...
In this thesis, a simplified Quantum Mechanics/Molecular Mechanics (QM/MM) method has been developed...
In this thesis, we present novel computational methods and frameworks to address the challenges asso...